C4B63_21g42

PAB1-binding protein
Trypanosoma cruzi Dm28c 2018 OG6: OG6_121235 OG7: OG7_0004413 13 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
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Network view all shared interactors, plus up to 150 more
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Interactions 13 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
C4B63_18g156 ⚠
protein mkt1
— Both
C4B63_79g39 ⚠
conserved hypothetical protein
— OG7
C4B63_397g11 ⚠
zinc-finger CCCH domain containing protein 11
— Both
C4B63_15g5 ⚠
zinc-finger CCCH domain containing protein 11
— Both
C4B63_2g331 ⚠
polyadenylate-binding protein 1
— Both
C4B63_2g350
Lsm12 protein
— Both
C4B63_2g174 ⚠
polyadenylate-binding protein 1
— Both
C4B63_9g387
conserved hypothetical protein
— OG7
C4B63_21g86
conserved hypothetical protein
— OG7
C4B63_10g483 ⚠
RNA-binding protein
— OG7
C4B63_83g24 ⚠
zinc-finger (CCCH type) protein
— OG7
C4B63_18g169 ⚠
Zinc finger CCCH domain-containing protein 47
— OG7
C4B63_12g2035c ⚠
zinc-finger protein 2
— OG7
Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.