TRSC58_00176

mismatch repair protein MSH3
Trypanosoma rangeli SC58 OG6: OG6_105075 OG7: OG7_0001337 27 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
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Interactions 27 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
TRSC58_00944 ⚠
hypothetical protein
— OG7
TRSC58_05042 ⚠
hypothetical protein
— OG7
TRSC58_01871 ⚠
RNA editing 3' terminal uridylyl transferase
— OG7
TRSC58_04575 ⚠
elongation factor 1-alpha
— OG7
TRSC58_02093 ⚠
hypothetical protein
— OG7
TRSC58_02114 ⚠
hypothetical protein
— OG7
TRSC58_04688 ⚠
hypothetical protein
— OG7
TRSC58_06766 ⚠
elongation factor 1-alpha (EF-1-alpha)
— OG7
TRSC58_02901 ⚠
elongation factor 1-alpha
— OG7
TRSC58_01384 ⚠
elongation factor 1-alpha (EF-1-alpha)
— OG7
TRSC58_00938 ⚠
eukaryotic release factor 3
— OG7
TRSC58_05580 ⚠
elongation factor 1-alpha
— OG7
TRSC58_00797 ⚠
elongation factor 1-alpha (EF-1-alpha)
— OG7
TRSC58_06737 ⚠
elongation factor 1-alpha (EF-1-alpha)
— OG7
TRSC58_00280 ⚠
hypothetical protein
— OG6
TRSC58_01666 ⚠
replication factor C, subunit 4
— OG7
TRSC58_06852 ⚠
replication factor C, subunit 4
— OG7
TRSC58_01575 ⚠
replication factor C, subunit 5
— OG7
TRSC58_04084 ⚠
replication factor C, subunit 3
— OG7
TRSC58_04312 ⚠
hypothetical protein
— OG7
TRSC58_05647 ⚠
replication factor C subunit 2/4
— OG7
TRSC58_02731 ⚠
replication factor C, subunit 2
— OG7
TRSC58_03272 ⚠
elongation factor 1-alpha (EF-1-alpha)
— Both
TRSC58_06180 ⚠
protein kinase
— OG6
TRSC58_06614 ⚠
hypothetical protein
— Both
TRSC58_00221 ⚠
DNA mismatch repair protein MSH2
— Both
TRSC58_04928 ⚠
hypothetical protein
— Both
Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.