TRSC58_03874

U6 snRNA-associated Sm-like protein LSm8p
Trypanosoma rangeli SC58 OG6: OG6_102771 OG7: OG7_0001217 127 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
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Interactions 127 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
TRSC58_02253 ⚠
small nuclear ribonucleoprotein Sm-G
— +3 more Both
TRSC58_01432 ⚠
hypothetical protein
— OG7
TRSC58_04711 ⚠
ATP-dependent RNA helicase DDX5/DBP2
— OG7
TRSC58_00703 ⚠
ATP-dependent DEAD/H RNA helicase
— OG7
TRSC58_05170 ⚠
small nuclear ribonucleoprotein Sm-F
— +3 more Both
TRSC58_04545 ⚠
ATP-dependent RNA helicase DDX46/PRP5
— OG7
TRSC58_04334 ⚠
ATP-dependent RNA helicase
— OG7
TRSC58_00761 ⚠
hypothetical protein
— OG7
TRSC58_05470 ⚠
ATP-dependent DEAD/H RNA helicase
— OG7
TRSC58_02748 ⚠
ATP-dependent RNA helicase
— OG7
TRSC58_03778 ⚠
U6 snRNA-associated Sm-like protein LSm6p
— +2 more OG7
TRSC58_06578 ⚠
U6 snRNA-associated Sm-like protein LSm7
— +2 more OG7
TRSC58_04189 ⚠
small nuclear ribonucleoprotein Sm-E
— +2 more OG7
TRSC58_02150 ⚠
mRNA capping methyltransferase
— OG7
TRSC58_06409 ⚠
hypothetical protein
— OG7
TRSC58_03664 ⚠
hypothetical protein
— OG7
TRSC58_00495 ⚠
geranylgeranyl transferase type II beta subun
— OG7
TRSC58_06826 ⚠
hypothetical protein
— OG7
TRSC58_06448 ⚠
hypothetical protein
— OG7
TRSC58_03827 ⚠
hypothetical protein
— OG7
TRSC58_02648 ⚠
protein farnesyltransferase
— OG7
TRSC58_00221 ⚠
DNA mismatch repair protein MSH2
— OG7
TRSC58_03654 ⚠
isoleucyl-tRNA synthetase
— OG7
TRSC58_00936 ⚠
ubiquitin activating enzyme
— OG7
TRSC58_04211 ⚠
hypothetical protein
— OG7
TRSC58_05573 ⚠
hypothetical protein
— OG7
TRSC58_02163 ⚠
hypothetical protein
— OG7
TRSC58_05173 ⚠
hypothetical protein
— OG7
TRSC58_01279 ⚠
hypothetical protein
— OG7
TRSC58_04825 ⚠
hypothetical protein
— OG7
TRSC58_00826 ⚠
hypothetical protein
— OG7
TRSC58_05514 ⚠
hypothetical protein
— OG7
TRSC58_01688 ⚠
protein kinase
— OG7
TRSC58_06815 ⚠
ubiquitin-protein ligase
— OG7
TRSC58_02832 ⚠
hypothetical protein
— OG7
TRSC58_01367 ⚠
endo-beta-N-acetylglucosaminidase
— OG7
TRSC58_04803 ⚠
hypothetical protein
— OG7
TRSC58_05313 ⚠
hypothetical protein
— OG7
TRSC58_04279 ⚠
glutathione synthetase
— OG7
TRSC58_04635 ⚠
hypothetical protein
— OG7
TRSC58_04238 ⚠
hypothetical protein
— OG7
TRSC58_04865 ⚠
hypothetical protein
— OG7
TRSC58_07035 ⚠
hypothetical protein
— OG7
TRSC58_06027 ⚠
hypothetical protein
— OG7
TRSC58_02094 ⚠
hypothetical protein
— OG7
TRSC58_01310 ⚠
hypothetical protein
— OG7
TRSC58_00085 ⚠
hypothetical protein
— OG7
TRSC58_05271 ⚠
hypothetical protein
— OG7
TRSC58_06114 ⚠
hypothetical protein
— OG7
TRSC58_00764 ⚠
hypothetical protein
— OG7
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Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.