TRSC58_04500

cleavage and polyadenylation specificity factor
Trypanosoma rangeli SC58 OG6: OG6_103283 OG7: OG7_0002417 149 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
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Interactions 149 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
TRSC58_04263 ⚠
cleavage and polyadenylation specificity fact
— Both
TRSC58_06233 ⚠
cytochrome b-domain protein
— OG7
TRSC58_05407 ⚠
hypothetical protein
— Both
TRSC58_04844 ⚠
hypothetical protein
— Both
TRSC58_00375 ⚠
mannose-1-phosphate guanyltransferase
— Both
TRSC58_04837 ⚠
hypothetical protein
— Both
TRSC58_05241 ⚠
tryptophanyl-tRNA synthetase
— Both
TRSC58_05861 ⚠
hypothetical protein
— Both
TRSC58_01103 ⚠
myo-inositol-1-phosphate synthase
— Both
TRSC58_07076 ⚠
dipeptidyl-peptidase 8-like serine peptidase
— Both
TRSC58_02832 ⚠
hypothetical protein
— Both
TRSC58_07732 ⚠
leucyl-tRNA synthetase
— Both
TRSC58_03727 ⚠
alanyl-tRNA synthetase
— Both
TRSC58_03542 ⚠
hypothetical protein
— Both
TRSC58_03654 ⚠
isoleucyl-tRNA synthetase
— Both
TRSC58_06650 ⚠
ribonuclease II-like protein
— Both
TRSC58_01090 ⚠
hypothetical protein
— Both
TRSC58_03555 ⚠
acidocalcisomal pyrophosphatase
— Both
TRSC58_02406 ⚠
AAA ATPase
— Both
TRSC58_04624 ⚠
RRP44p like proteinue
— OG7
TRSC58_00367 ⚠
mitochondrial exoribonuclease DSS-1
— OG7
TRSC58_06592 ⚠
hypothetical protein
— OG7
TRSC58_06720 ⚠
hypothetical protein
— OG7
TRSC58_01178 ⚠
tyrosyl or methionyl-tRNA synthetase
— OG7
TRSC58_05705 ⚠
tryptophanyl-tRNA synthetase
— OG7
TRSC58_02059 ⚠
hypothetical protein
— OG7
TRSC58_02755 ⚠
glycosyl hydrolase-like protein
— OG7
TRSC58_05475 ⚠
hypothetical protein
— OG7
TRSC58_03005 ⚠
ABC transporter
— OG7
TRSC58_06361 ⚠
hypothetical protein
— OG7
TRSC58_06424 ⚠
retrotransposon hot spot (RHS) protein
— OG7
TRSC58_01030 ⚠
ATP-binding protein cassette protein
— OG7
TRSC58_00042 ⚠
nuclear movement protein
— OG7
TRSC58_07003 ⚠
hypothetical protein
— OG7
TRSC58_01499 ⚠
hypothetical protein
— OG7
TRSC58_07193 ⚠
hypothetical protein
— OG7
TRSC58_07112 ⚠
hypothetical protein
— OG7
TRSC58_06890 ⚠
hypothetical protein
— OG7
TRSC58_01120 ⚠
hypothetical protein
— OG7
TRSC58_05174 ⚠
hypothetical protein
— OG7
TRSC58_03247 ⚠
protein kinase
— OG7
TRSC58_04581 ⚠
hypothetical protein
— OG7
TRSC58_03578 ⚠
hypothetical protein
— OG7
TRSC58_01476 ⚠
hypothetical protein
— OG7
TRSC58_02099 ⚠
hypothetical protein
— OG7
TRSC58_06309 ⚠
hypothetical protein
— OG7
TRSC58_02091 ⚠
stress-induced protein sti1
— OG7
TRSC58_02773 ⚠
hypothetical protein
— OG7
TRSC58_05885 ⚠
cyclic nucleotide-binding protein
— OG7
TRSC58_04869 ⚠
hypothetical protein
— OG7
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Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.