TRSC58_06528

nucleolar RNA helicase II
Trypanosoma rangeli SC58 OG6: OG6_102022 OG7: OG7_0000122 18 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
Applies on "Apply filters".
Reset
⬇ CSV
Network view all shared interactors, plus up to 150 more
Show:
Selection: Shift+drag also box-selects. Drag any selected node to move the whole selection.
Interactions 18 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
TRSC58_06305 ⚠
hypothetical protein
— Both
TRSC58_04218 ⚠
dynein intermediate chain
— OG7
TRSC58_00410 ⚠
hypothetical protein
— OG7
TRSC58_00346 ⚠
dynein intermediate chain
— OG7
TRSC58_06920 ⚠
hypothetical protein
— OG7
TRSC58_06068 ⚠
hypothetical protein
— OG7
TRSC58_06517 ⚠
hypothetical protein
— OG7
TRSC58_01471 ⚠
hypothetical protein
— Both
TRSC58_02138 ⚠
mitochondrial DNA topoisomerase II
— Both
TRSC58_00552 ⚠
hypothetical protein
— Both
TRSC58_01989 ⚠
hypothetical protein
— Both
TRSC58_01498 ⚠
DNA topoisomerase II
— Both
TRSC58_00810 ⚠
hypothetical protein
— Both
TRSC58_03439 ⚠
hypothetical protein
— Both
TRSC58_01165 ⚠
hypothetical protein
— Both
TRSC58_02392 ⚠
60S ribosomal protein L29
— Both
TRSC58_00044 ⚠
60S acidic ribosomal protein
— Both
TRSC58_01583 ⚠
DNA topoisomerase IA
— Both
Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.