TcIL3000_3_2560

RNA-binding protein (fragment)
Trypanosoma congolense IL3000 OG6: OG6_108327 OG7: OG7_0002956 22 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
Applies on "Apply filters".
Reset
⬇ CSV
Network view all shared interactors, plus up to 150 more
Show:
Selection: Shift+drag also box-selects. Drag any selected node to move the whole selection.
Interactions 22 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
TcIL3000_0_34250 ⚠
hypothetical protein
— OG7
TcIL3000.11.750 ⚠
protein kinase, putative
— OG7
TcIL3000_0_53340 ⚠
protein kinase, putative (fragment)
— OG7
TcIL3000_0_02850 ⚠
protein kinase, putative
— OG7
TcIL3000_9_5510 ⚠
ankyrin repeat protein, putative
— OG7
TcIL3000_10_11090 ⚠
predicted ankyrin repeat family protein
— OG7
TcIL3000_7_5840 ⚠
Ankyrin repeats (3 copies), putative
— OG7
TcIL3000_5_680 ⚠
monothiol glutaredoxin, putative
— OG7
TcIL3000_3_3060 ⚠
Ankyrin repeats (many copies)/Ankyrin repeats
— OG7
TcIL3000_0_47240 ⚠
monothiol glutaredoxin, putative
— OG7
TcIL3000_7_5390 ⚠
hypothetical protein, conserved (fragment)
— OG7
TcIL3000_10_1320 ⚠
ras-related protein Rab21, putative
— OG6
TcIL3000_9_1080 ⚠
monothiol glutaredoxin, Grx4 family, putative
— Both
TcIL3000_0_30490 ⚠
monothiol glutaredoxin, putative
— Both
TcIL3000.11.13760 ⚠
hypothetical protein, conserved
— OG6
TcIL3000_9_2620 ⚠
huntingtin interacting protein (HIP), putativ
— OG6
TcIL3000_9_900 ⚠
cytidine deaminase, putative
— Both
TcIL3000_0_56540 ⚠
Temperature dependent protein affecting M2 ds
— OG6
TcIL3000_6_4240 ⚠
protein mkt1, putative
— OG6
TcIL3000_0_14140 ⚠
Uncharacterised ACR, YggU family COG1872, put
— Both
TcIL3000_4_2890 ⚠
Uncharacterised ACR, YggU family COG1872, put
— Both
TcIL3000.11.15240 ⚠
small GTPase
— OG6
Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.