TcYC6_0107020

putative mitochondrial RNA binding protein
Trypanosoma cruzi Y C6 OG6: OG6_139801 OG7: OG7_0037778 60 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
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Interactions 60 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
TcYC6_0107030
hypothetical protein, conserved
— Both
TcYC6_0078200 ⚠
mitochondrial RNA binding complex 1 subunit,
— +1 more Both
TcYC6_0125560 ⚠
putative mitochondrial RNA binding complex 1
— Both
TcYC6_0064650 ⚠
hypothetical protein, conserved
— OG7
TcYC6_0078660
mitochondrial RNA binding complex 1 subunit,
— Both
TcYC6_0021970
mitochondrial RNA binding complex 1 subunit,
— Both
TcYC6_0051260
mitochondrial RNA binding complex 1 subunit,
— Both
TcYC6_0123950
mitochondrial RNA binding complex 1 subunit
— Both
TcYC6_0119380
hypothetical protein
— Both
TcYC6_0044860
hypothetical protein
— Both
TcYC6_0124480
RNA-binding protein RGGm
— OG6
TcYC6_0083720 ⚠
40S ribosomal protein S8, putative
— Both
TcYC6_0083710 ⚠
40S ribosomal protein S8, putative
— Both
TcYC6_0077250
guide RNA associated protein 1, putative
— Both
TcYC6_0030980
inositol 1,4,5-trisphosphate receptor, putati
— Both
TcYC6_0077240
heterogeneous nuclear ribonucleoprotein H/F,
— Both
TcYC6_0084480 ⚠
ribosomal protein S7, putative
— Both
TcYC6_0079170
mitochondrial RNA binding protein, putative
— Both
TcYC6_0084470 ⚠
ribosomal protein S7, putative
— Both
TcYC6_0017430 ⚠
conserved protein, unknown function
— Both
TcYC6_0018540 ⚠
RNA editing 3' terminal uridylyl transferase
— OG7
TcYC6_0057760 ⚠
RNA editing complex protein MP57, putative
— OG7
TcYC6_0127710 ⚠
putative RNA editing 3' terminal uridylyl tra
— OG7
TcYC6_0110540 ⚠
Domain of unknown function (DUF4379), putativ
— OG7
TcYC6_0126030 ⚠
ATP-dependent DEAD/H RNA helicase, putative
— OG7
TcYC6_0126010 ⚠
ATP-dependent DEAD/H RNA helicase, putative
— OG7
TcYC6_0124230 ⚠
hypothetical protein
— OG7
TcYC6_0070250 ⚠
ATP-dependent RNA helicase, putative
— OG7
TcYC6_0051630 ⚠
ATP-dependent RNA helicase, putative
— OG7
TcYC6_0034880 ⚠
ATP-dependent RNA helicase, putative
— OG7
TcYC6_0069010 ⚠
hypothetical protein, conserved
— OG7
TcYC6_0003510 ⚠
MRB1 complex subunit MRB3010
— Both
TcYC6_0067390
40S ribosomal protein S6, putative
— Both
TcYC6_0022920
hypothetical protein, conserved
— Both
TcYC6_0058510 ⚠
40S ribosomal protein S16, putative
— Both
TcYC6_0057980 ⚠
40S ribosomal protein S16, putative
— Both
TcYC6_0095550
hypothetical protein, conserved
— Both
TcYC6_0061650
hypothetical protein, conserved
— Both
TcYC6_0005380 ⚠
KREL2
— Both
TcYC6_0059270
mitochondrial RNA binding complex 1 subunit,
— Both
TcYC6_0119160
mitochondrial RNA binding complex 1 subunit,
— Both
TcYC6_0115810 ⚠
60S ribosomal protein L10a, putative
— Both
TcYC6_0007150 ⚠
60S ribosomal protein L10a, putative
— Both
TcYC6_0000270 ⚠
kinetoplast polyadenylation/uridylation facto
— Both
TcYC6_0025710
phytanoyl-CoA dioxygenase (PhyH), putative
— Both
TcYC6_0093170
guide RNA associated protein, GAP2, putative
— Both
TcYC6_0102690 ⚠
40S ribosomal protein S4, putative
— Both
TcYC6_0084320 ⚠
KREL1
— Both
TcYC6_0065220 ⚠
MRB1 complex subunit MRB3010
— Both
TcYC6_0095010
mitochondrial RNA binding protein 1, putative
— Both
Page 1 of 2
Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.