C4B63_17g54

RNA-binding protein
Trypanosoma cruzi Dm28c 2018 OG6: OG6_134873 OG7: OG7_0034076 58 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
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Interactions 58 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
C4B63_19g30 ⚠
cysteine desulfurase
— Both
C4B63_157g32 ⚠
inosine-5'-monophosphate dehydrogenase
— OG6
C4B63_19g268 ⚠
conserved hypothetical protein
— Both
C4B63_233g12 ⚠
rRNA processing protein
— Both
C4B63_148g34 ⚠
pumilio/PUF RNA binding protein 7
— Both
C4B63_37g373 ⚠
ribosome biogenesis protein
— Both
C4B63_260g14 ⚠
inosine-5'-monophosphate dehydrogenase
— OG6
C4B63_4g178 ⚠
60S ribosomal protein L10a
— Both
C4B63_39g319 ⚠
60S ribosomal protein L10a
— Both
C4B63_55g62 ⚠
Ribosomal RNA small subunit methyltransferase
— Both
C4B63_19g270 ⚠
conserved hypothetical protein
— Both
C4B63_38g299 ⚠
inosine-5'-monophosphate dehydrogenase
— OG6
C4B63_132g76 ⚠
60S ribosomal protein L10a
— Both
C4B63_23g249 ⚠
peter pan protein
— Both
C4B63_17g243 ⚠
pumilio/PUF RNA binding protein 7
— Both
C4B63_62g90 ⚠
ribosome biogenesis protein
— Both
C4B63_40g189 ⚠
40S ribosomal protein SA
— Both
C4B63_25g113 ⚠
GMP reductase
— Both
C4B63_260g15 ⚠
inosine-5'-monophosphate dehydrogenase
— OG6
C4B63_12g329 ⚠
conserved hypothetical protein
— Both
C4B63_15g11 ⚠
KRI1-like family/KRI1-like family C-terminal
— Both
C4B63_3g1088 ⚠
conserved hypothetical protein
— Both
C4B63_75g42 ⚠
rRNA processing protein
— Both
C4B63_42g179 ⚠
ribosome biogenesis regulatory protein (RRS1)
— Both
C4B63_117g55 ⚠
inosine-5'-monophosphate dehydrogenase
— OG6
C4B63_99g108 ⚠
conserved hypothetical protein
— Both
C4B63_184g18 ⚠
EMG1/NEP1 methyltransferase
— OG7
C4B63_9g211 ⚠
EMG1/NEP1 methyltransferase
— OG7
C4B63_9g433 ⚠
mitochondrial RNA binding complex 1 subunit
— OG7
C4B63_21g31 ⚠
conserved hypothetical protein
— OG7
C4B63_1g74 ⚠
eukaryotic translation initiation factor 2 su
— Both
C4B63_8g476 ⚠
40S ribosomal protein S16
— Both
C4B63_8g2554c ⚠
40S ribosomal protein S16
— Both
C4B63_4g79 ⚠
ribosome biogenesis protein
— Both
C4B63_207g9 ⚠
ribosome biogenesis protein
— Both
C4B63_170g19 ⚠
40S ribosomal protein S4
— Both
C4B63_170g22 ⚠
40S ribosomal protein S4
— Both
C4B63_170g18 ⚠
40S ribosomal protein S4
— Both
C4B63_170g20 ⚠
40S ribosomal protein S4
— Both
C4B63_170g17 ⚠
40S ribosomal protein S4
— Both
C4B63_46g76 ⚠
40S ribosomal protein S4
— Both
C4B63_170g21 ⚠
40S ribosomal protein S4
— Both
C4B63_46g77 ⚠
40S ribosomal protein S4
— Both
C4B63_44g193 ⚠
mitochondrial RNA binding complex 1 subunit
— Both
C4B63_75g59 ⚠
40S ribosomal protein S6
— Both
C4B63_5g417 ⚠
eukaryotic translation initiation factor 2 su
— Both
C4B63_63g15 ⚠
ribosomal protein L1-like protein
— Both
C4B63_9g319 ⚠
heterogeneous nuclear ribonucleoprotein H/F
— Both
C4B63_85g45 ⚠
ribosomal protein S7
— Both
C4B63_85g44 ⚠
ribosomal protein S7
— Both
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Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.