LPAL13_200029500

RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative
Leishmania panamensis MHOM/COL/81/L13 OG6: OG6_147041 OG7: OG7_0000011 22 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
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Interactions 22 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
LPAL13_170018800
translation initiation factor, putative
— OG6
LPAL13_300034700
eukaryotic translation initiation factor 3 su
— OG6
LPAL13_350019100
N-acetyltransferase subunit Nat1, putative
— OG6
LPAL13_280030700
eukaryotic translation initiation factor, put
— OG6
LPAL13_350081600
eukaryotic translation initiation factor 3 su
— OG6
LPAL13_170005300
hypothetical protein, conserved
— OG6
LPAL13_240018200
translation factor sui1, putative
— OG6
LPAL13_300011200
spliceosome-associated protein, putative
— OG6
LPAL13_270015800 ⚠
2-oxoglutarate dehydrogenase subunit, putativ
— OG6
LPAL13_340035800
ATP-dependent RNA helicase, putative
— OG6
LPAL13_070014500
splicing factor ptsr1-like protein
— OG6
LPAL13_290019200
hypothetical protein, conserved
— OG6
LPAL13_250024300
hypothetical protein, conserved
— OG6
LPAL13_290015300 ⚠
ribosomal protein L1a, putative
— OG6
LPAL13_290015400 ⚠
Ribosomal protein L4/L1 family/60S ribosomal
— OG6
LPAL13_190011100
hypothetical protein, conserved
— OG6
LPAL13_350046700 ⚠
60S ribosomal protein L10a, putative
— OG6
LPAL13_000045600 ⚠
60S ribosomal protein L10a, putative
— OG6
LPAL13_000025000 ⚠
ribosomal protein L1a, putative
— OG6
LPAL13_200007400
eukaryotic translation initiation factor 5, p
— OG6
LPAL13_350043400 ⚠
2-oxoglutarate dehydrogenase subunit, putativ
— OG6
LPAL13_350047800
eukaryotic translation initiation factor 3 su
— OG6
Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.