LTRL590_320012800

U6 snRNA-associated Sm-like protein LSm4p
Leishmania tropica L590 OG6: OG6_102392 OG7: OG7_0003694 54 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
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Interactions 54 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
LTRL590_220014700 ⚠
small nuclear ribonucleoprotein, putative
— OG7
LTRL590_250024100 ⚠
Leucine-rich repeat, putative
— OG7
LTRL590_320009100 ⚠
ATP-dependent RNA helicase, putative
— OG7
LTRL590_080005700 ⚠
ATP-dependent DEAD/H RNA helicase, putative
— OG7
LTRL590_360029000 ⚠
DEAD box RNA helicase, putative
— OG7
LTRL590_070009200 ⚠
ATP-dependent DEAD/H RNA helicase, putative
— OG7
LTRL590_270032300 ⚠
WD-repeat protein
— OG7
LTRL590_210008700 ⚠
U1 small nuclear ribonucleoprotein C, putativ
— OG7
LTRL590_360084200 ⚠
U1A small nuclear ribonucleoprotein, putative
— OG7
LTRL590_320006800 ⚠
U2 small nuclear ribonucleoprotein 40K, putat
— OG7
LTRL590_360012800 ⚠
Protein C21orf2 homolog, putative
— OG7
LTRL590_350039200 ⚠
occurring C-terminal to leucine-rich repeats,
— OG7
LTRL590_070008600 ⚠
hypothetical protein, conserved
— OG7
LTRL590_030006000 ⚠
Leucine Rich repeats (2 copies), putative
— OG7
LTRL590_000021800 ⚠
DEAD/DEAH box helicase, putative
— OG7
LTRL590_350054000 ⚠
Hsp70 protein, putative
— OG7
LTRL590_280018200 ⚠
Hsp70 protein, putative
— OG7
LTRL590_280035400 ⚠
Hsp70 protein, putative
— OG7
LTRL590_280018100 ⚠
heat-shock protein hsp70, putative
— OG7
LTRL590_260013700 ⚠
heat shock 70 protein-like protein
— OG7
LTRL590_180018800 ⚠
heat shock protein 110, putative
— OG7
LTRL590_260017200 ⚠
heat-shock protein hsp70, putative
— OG7
LTRL590_010011800 ⚠
HSP70-like protein
— OG7
LTRL590_210022400 ⚠
arginine N-methyltransferase, type II, putati
— OG7
LTRL590_250028100 ⚠
elongation factor 2-like protein
— OG7
LTRL590_320029300 ⚠
small nuclear ribonucleoprotein component-lik
— OG7
LTRL590_000012300 ⚠
elongation factor 2
— OG7
LTRL590_360007100 ⚠
Elongation factor G C-terminus, putative
— OG7
LTRL590_330041400 ⚠
small nuclear ribonucleoprotein SmD2
— OG7
LTRL590_360076300 ⚠
poly(A)-specific ribonuclease PARN, putative
— Both
LTRL590_270027100 ⚠
small nuclear ribonucleoprotein protein, puta
— OG7
LTRL590_250024200 ⚠
LSM domain containing protein, putative
— +2 more OG7
LTRL590_350051500 ⚠
sm-f snRNP core complex protein, putative
— +2 more OG7
LTRL590_320017200 ⚠
small nuclear ribonucleoprotein, putative
— +2 more OG7
LTRL590_010006500 ⚠
LSM domain containing protein, putative
— +2 more OG7
LTRL590_300018400 ⚠
small nuclear ribonucleoprotein polypeptide e
— +2 more OG7
LTRL590_300020300 ⚠
WD domain, G-beta repeat, putative
— OG7
LTRL590_280037000 ⚠
U5 snRNP-specific 40 kDa protein, putative
— OG7
LTRL590_280035000 ⚠
WD domain, G-beta repeat, putative
— OG7
LTRL590_280035100 ⚠
receptor for activated C kinase 1
— OG7
LTRL590_360011200 ⚠
WD domain, G-beta repeat, putative
— OG7
LTRL590_230012300 ⚠
poly(A)-specific ribonuclease PARN, putative
— Both
LTRL590_320032300 ⚠
hypothetical protein, conserved
— OG7
LTRL590_350046100 ⚠
U5 snRNA-associated splicing factor
— OG7
LTRL590_160019600 ⚠
LSM domain containing protein, putative
— OG7
LTRL590_160024000 ⚠
Putative snoRNA binding domain containing pro
— OG7
LTRL590_010010900 ⚠
pre-mRNA processing factor 3 (PRP3)/Protein o
— OG7
LTRL590_230008500 ⚠
Checkpoint protein HUS1
— OG7
LTRL590_230015000 ⚠
spliceosomal U5 snRNP-specific protein, putat
— OG7
LTRL590_300040400 ⚠
Lsm5p, putative
— OG7
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Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.