LTRL590_250024200

LSM domain containing protein, putative
Leishmania tropica L590 OG6: OG6_102771 OG7: OG7_0001217 144 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
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Interactions 144 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
LTRL590_280028300 ⚠
mitochondrial DEAD box protein, putative
— OG7
LTRL590_070009100 ⚠
hypothetical protein
— OG7
LTRL590_350037000 ⚠
ATP-dependent RNA helicase, putative
— OG7
LTRL590_320017200 ⚠
small nuclear ribonucleoprotein, putative
— +3 more Both
LTRL590_360029000 ⚠
DEAD box RNA helicase, putative
— OG7
LTRL590_350051500 ⚠
sm-f snRNP core complex protein, putative
— +3 more Both
LTRL590_070009200 ⚠
ATP-dependent DEAD/H RNA helicase, putative
— OG7
LTRL590_010006500 ⚠
LSM domain containing protein, putative
— +2 more OG7
LTRL590_300018400 ⚠
small nuclear ribonucleoprotein polypeptide e
— +2 more OG7
LTRL590_000021800 ⚠
DEAD/DEAH box helicase, putative
— OG7
LTRL590_320009100 ⚠
ATP-dependent RNA helicase, putative
— OG7
LTRL590_080005700 ⚠
ATP-dependent DEAD/H RNA helicase, putative
— OG7
LTRL590_360006400 ⚠
mRNA capping methyltransferase, putative
— OG7
LTRL590_350061200 ⚠
SPRY domain/HECT-domain (ubiquitin-transferas
— OG7
LTRL590_330026400 ⚠
Ribosome assembly protein rrb1, putative
— OG7
LTRL590_260016600 ⚠
hypothetical protein, conserved
— OG7
LTRL590_160018500 ⚠
WW domain containing protein, putative
— OG7
LTRL590_340046400 ⚠
geranylgeranyltransferase, putative
— OG7
LTRL590_260017600 ⚠
hypothetical protein, conserved
— OG7
LTRL590_350014100 ⚠
hypothetical protein, conserved
— OG7
LTRL590_330009500 ⚠
DNA mismatch repair protein MSH2, putative
— OG7
LTRL590_320016900 ⚠
hypothetical protein, conserved
— OG7
LTRL590_000027600 ⚠
Ribosome assembly protein rrb1, putative
— OG7
LTRL590_320017400 ⚠
HECT-domain (ubiquitin-transferase), putative
— OG7
LTRL590_350038100 ⚠
RNA-binding protein, putative
— OG7
LTRL590_330030900 ⚠
glycosyl hydrolase-like protein
— OG7
LTRL590_350054900 ⚠
BRCA1 C Terminus (BRCT) domain containing pro
— OG7
LTRL590_300012900 ⚠
co-chaperone GrpE, putative
— OG7
LTRL590_350033300 ⚠
Short calmodulin-binding motif containing con
— OG7
LTRL590_350052400 ⚠
Cysteine-rich motif following a subset of SET
— OG7
LTRL590_360054700 ⚠
ubiquitin protein ligase, putative
— OG7
LTRL590_360060700 ⚠
Calponin homology (CH) domain containing prot
— OG7
LTRL590_260019700 ⚠
farnesyltransferase beta subunit
— OG7
LTRL590_300011300 ⚠
hypothetical protein, conserved
— OG7
LTRL590_340032500 ⚠
hypothetical protein, conserved
— OG7
LTRL590_300015300 ⚠
ubiquitin-protein ligase, putative
— OG7
LTRL590_340045700 ⚠
HECT-domain (ubiquitin-transferase), putative
— OG7
LTRL590_350029900 ⚠
ubiquitin-protein ligase, putative
— OG7
LTRL590_300013000 ⚠
heat shock protein grpe
— OG7
LTRL590_290032800 ⚠
protein kinase, putative
— OG7
LTRL590_030009300 ⚠
TLD domain protein, conserved
— OG7
LTRL590_360084200 ⚠
U1A small nuclear ribonucleoprotein, putative
— OG7
LTRL590_280018400 ⚠
hypothetical protein, conserved
— OG7
LTRL590_130018500 ⚠
hypothetical protein, conserved
— OG7
LTRL590_010008800 ⚠
Dyggve-Melchior-Clausen syndrome protein, put
— OG7
LTRL590_080009500 ⚠
WD domain, G-beta repeat, putative
— OG7
LTRL590_130019100 ⚠
hypothetical protein, conserved
— OG7
LTRL590_060014800 ⚠
TLD, putative
— OG7
LTRL590_350054000 ⚠
Hsp70 protein, putative
— OG7
LTRL590_230008500 ⚠
Checkpoint protein HUS1
— OG7
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Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.