TcIL3000.11.6250

RNA-binding protein 38, putative
Trypanosoma congolense IL3000 OG6: OG6_147560 OG7: OG7_0043873 38 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
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Interactions 38 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
TcIL3000.11.5520 ⚠
ubiquitin carboxyl-terminal hydrolase, putati
— OG7
TcIL3000_0_18970 ⚠
cysteine peptidase, Clan CA, family C2, putat
— OG6
TcIL3000_9_2550 ⚠
hypothetical protein
— OG6
TcIL3000_0_54930 ⚠
cysteine peptidase, Clan CA, family C2, putat
— OG6
TcIL3000_9_2560 ⚠
cysteine peptidase, Clan CA, family C2, putat
— OG6
TcIL3000_0_00650 ⚠
Inositol hexakisphosphate, putative
— Both
TcIL3000_0_47580 ⚠
hypothetical protein (fragment)
— Both
TcIL3000_0_47590 ⚠
ubiquitin carboxyl-terminal hydrolase, putati
— Both
TcIL3000_10_1820 ⚠
Peptidase C19, ubiquitin carboxyl-terminal hy
— OG7
TcIL3000_0_02310 ⚠
ubiquitin carboxyl-terminal hydrolase, putati
— OG7
TcIL3000_10_13130 ⚠
hypothetical protein (fragment)
— Both
TcIL3000.11.5490 ⚠
ubiquitin carboxyl-terminal hydrolase, putati
— OG7
TcIL3000_0_20100 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_0_46480 ⚠
'Cold-shock' DNA-binding domain containing pr
— OG7
TcIL3000_0_45960 ⚠
'Cold-shock' DNA-binding domain containing pr
— OG7
TcIL3000_10_3660 ⚠
leucine carboxyl methyltransferase, putative
— OG7
TcIL3000_0_55460 ⚠
'Cold-shock' DNA-binding domain containing pr
— OG7
TcIL3000_0_09950 ⚠
'Cold-shock' DNA-binding domain containing pr
— OG7
TcIL3000_0_24190 ⚠
'Cold-shock' DNA-binding domain containing pr
— OG7
TcIL3000_9_4970 ⚠
hypothetical protein, conserved (fragment)
— Both
TcIL3000_0_57520 ⚠
kinetoplastid-specific phospho-protein phosph
— OG6
TcIL3000.11.5140 ⚠
hypothetical protein, conserved
— Both
TcIL3000_0_18660 ⚠
kinetoplastid-specific phospho-protein phosph
— OG6
TcIL3000_0_24860 ⚠
kinetoplastid-specific phospho-protein phosph
— OG6
TcIL3000_0_50470 ⚠
Zinc finger, C3HC4 type (RING finger) contain
— Both
TcIL3000_5_5010 ⚠
serine/threonine protein phosphatase, putativ
— OG6
TcIL3000_0_59510 ⚠
hypothetical protein, conserved (fragment)
— Both
TcIL3000.11.12040 ⚠
hypothetical protein, conserved
— Both
TcIL3000_10_7930 ⚠
Cyclin 12, L-type
— Both
TcIL3000_10_2760 ⚠
hypothetical protein, conserved
— Both
TcIL3000_6_3400 ⚠
Docking domain of Afi1 for Arf3 in vesicle tr
— Both
TcIL3000_0_52960 ⚠
Docking domain of Afi1 for Arf3 in vesicle tr
— Both
TcIL3000_0_41040 ⚠
leucine carboxyl methyltransferase, putative
— Both
TcIL3000_9_4960 ⚠
Putative death-receptor fusion protein (DUF24
— Both
TcIL3000_2_850 ⚠
cdc2-related kinase 9
— OG6
TcIL3000_10_7810 ⚠
hypothetical protein, conserved
— Both
TcIL3000_9_5290 ⚠
Leucine carboxyl methyltransferase/Cupin-like
— Both
TcIL3000_10_13140 ⚠
hypothetical protein, conserved
— Both
Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.