TcIL3000_0_55310

40S ribosomal protein S4, putative
Trypanosoma congolense IL3000 OG6: OG6_100732 OG7: OG7_0004517 130 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
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Interactions 130 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
TcIL3000_10_9750 ⚠
40S ribosomal protein S3, putative
— +2 more Both
TcIL3000_9_2070 ⚠
40S ribosomal protein S3, putative
— +2 more Both
TcIL3000.11.11590 ⚠
40S ribosomal protein SA, putative
— +2 more Both
TcIL3000.11.11460 ⚠
40S ribosomal protein SA, putative
— +2 more Both
TcIL3000_9_6460 ⚠
40S ribosomal protein S6, putative
— Both
TcIL3000_10_60 ⚠
40S ribosomal protein S6, putative
— Both
TcIL3000_7_750 ⚠
40S ribosomal protein S16, putative
— +2 more Both
TcIL3000_0_42440 ⚠
60S ribosomal protein L13, putative
— +2 more Both
TcIL3000_10_3260 ⚠
40S ribosomal protein S3A, putative
— Both
TcIL3000_10_11930 ⚠
60S ribosomal protein L7, putative
— OG7
TcIL3000_0_20590 ⚠
60S ribosomal protein L13a, putative
— +2 more Both
TcIL3000_0_19490 ⚠
ribosomal protein S7, putative
— Both
TcIL3000_9_1270 ⚠
ribosomal protein S7, putative
— Both
TcIL3000_4_1520 ⚠
ribosomal protein S19, putative
— +2 more Both
TcIL3000_0_27750 ⚠
60S ribosomal protein L7a, putative
— Both
TcIL3000_0_39590 ⚠
60S ribosomal protein L7a, putative
— Both
TcIL3000_0_39600 ⚠
60S ribosomal protein L7a, putative
— Both
TcIL3000_10_4480 ⚠
40S ribosomal protein S18, putative
— Both
TcIL3000_10_4490 ⚠
40S ribosomal protein S18, putative
— Both
TcIL3000_8_6000 ⚠
40S ribosomal protein S8, putative
— +2 more Both
TcIL3000_8_6010 ⚠
40S ribosomal protein S8, putative
— +2 more Both
TcIL3000_0_32580 ⚠
60S ribosomal protein L7, putative
— Both
TcIL3000_10_12580 ⚠
40S ribosomal protein S2, putative
— Both
TcIL3000_8_8330 ⚠
mitochondrial RNA binding protein 1, putative
— Both
TcIL3000_10_6310 ⚠
40S ribosomal protein S24E, putative
— Both
TcIL3000_10_890 ⚠
40S ribosomal protein S23, putative
— Both
TcIL3000_10_6320 ⚠
40S ribosomal protein S24E, putative
— Both
TcIL3000_10_4740 ⚠
40S ribosomal protein S9, putative (fragment)
— Both
TcIL3000_8_730 ⚠
40S ribosomal protein S9, putative
— Both
TcIL3000_0_11250 ⚠
calpain, putative (fragment)
— Both
TcIL3000_0_14580 ⚠
calpain, putative (fragment)
— Both
TcIL3000.11.1030 ⚠
cysteine peptidase, Clan CA, family C2, putat
— Both
TcIL3000_10_3470 ⚠
hypothetical protein, conserved
— Both
TcIL3000_2_1370 ⚠
hypothetical protein, conserved
— Both
TcIL3000_0_05440 ⚠
calpain, putative (fragment)
— Both
TcIL3000_10_14030 ⚠
Calpain-like protein 2
— OG6
TcIL3000_10_10550 ⚠
hypothetical protein, conserved
— Both
TcIL3000_0_19940 ⚠
60S ribosomal subunit protein L31, putative
— Both
TcIL3000_0_26260 ⚠
Calpain-like protein 2
— OG6
TcIL3000_3_3480 ⚠
Tb-292 membrane associated protein
— Both
TcIL3000_9_1850 ⚠
Eukaryotic translation initiation factor 4 ga
— Both
TcIL3000_0_17140 ⚠
2-oxoglutarate dehydrogenase E1 component, pu
— Both
TcIL3000_6_270 ⚠
60S ribosomal protein L14, putative
— Both
TcIL3000_0_08120 ⚠
Calpain family cysteine protease, putative (f
— Both
TcIL3000_9_5060 ⚠
60S ribosomal subunit protein L31, putative
— Both
TcIL3000.11.1040 ⚠
calpain, putative (fragment)
— Both
TcIL3000.11.11880 ⚠
60S ribosomal protein L14, putative
— Both
TcIL3000_9_4330 ⚠
Elongation factor Tu GTP binding domain conta
— OG7
TcIL3000.11.6690 ⚠
eukaryotic release factor 3, putative
— OG7
TcIL3000_9_4320 ⚠
elongation factor 1-alpha, putative
— OG7
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Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.