TcIL3000_8_8330

mitochondrial RNA binding protein 1, putative
Trypanosoma congolense IL3000 OG6: OG6_139801 OG7: OG7_0037778 75 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
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Interactions 75 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
TcIL3000_4_3560 ⚠
hypothetical protein, conserved
— Both
TcIL3000_8_4480 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_10_4880 ⚠
hypothetical protein, conserved
— Both
TcIL3000_8_8340 ⚠
mitochondrial RNA binding complex 1 subunit
— Both
TcIL3000_2_1690 ⚠
mitochondrial RNA binding complex 1 subunit (
— +1 more Both
TcIL3000_2_1680 ⚠
hypothetical protein, conserved (fragment)
— +1 more Both
TcIL3000_8_6010 ⚠
40S ribosomal protein S8, putative
— Both
TcIL3000.11.15670 ⚠
mitochondrial RNA binding complex 1 subunit,
— Both
TcIL3000_10_8280 ⚠
mitochondrial RNA binding complex 1 subunit
— Both
TcIL3000_3_940 ⚠
mitochondrial RNA binding complex 1 subunit
— Both
TcIL3000_0_25010 ⚠
mitochondrial RNA binding complex 1 subunit
— Both
TcIL3000_2_500 ⚠
guide RNA associated protein 1, putative
— Both
TcIL3000_0_40480 ⚠
guide RNA associated protein, GAP1
— Both
TcIL3000.11.8090 ⚠
mRNA processing protein, putative
— Both
TcIL3000_8_6000 ⚠
40S ribosomal protein S8, putative
— Both
TcIL3000_0_00140 ⚠
hypothetical protein
— Both
TcIL3000_8_2660 ⚠
inositol 1,4,5-trisphosphate receptor, putati
— Both
TcIL3000.11.14360 ⚠
nuclear RNA binding domain
— Both
TcIL3000.11.11460 ⚠
40S ribosomal protein SA, putative
— Both
TcIL3000_9_1270 ⚠
ribosomal protein S7, putative
— Both
TcIL3000_0_55310 ⚠
40S ribosomal protein S4, putative
— Both
TcIL3000_10_6290 ⚠
terminal uridylyltransferase 3, putative
— OG7
TcIL3000_9_5280 ⚠
pentatricopeptide repeat domain containing pr
— OG7
TcIL3000_0_33680 ⚠
hypothetical protein (fragment)
— OG7
TcIL3000_3_2910 ⚠
Domain of unknown function (DUF4379), putativ
— OG7
TcIL3000_9_4330 ⚠
Elongation factor Tu GTP binding domain conta
— OG7
TcIL3000.11.6690 ⚠
eukaryotic release factor 3, putative
— OG7
TcIL3000_9_4320 ⚠
elongation factor 1-alpha, putative
— OG7
TcIL3000_0_08320 ⚠
eukaryotic release factor 3, putative
— OG7
TcIL3000_7_1050 ⚠
RNA editing complex MP57, putative, RNA editi
— OG7
TcIL3000_0_46520 ⚠
RNA-editing complex protein
— OG7
TcIL3000.11.1450 ⚠
cysteine desulfurase, putative
— Both
TcIL3000_10_240 ⚠
hypothetical protein, conserved
— Both
TcIL3000_10_10050 ⚠
hypothetical protein, conserved
— Both
TcIL3000_1_1090 ⚠
conserved protein, unknown function
— Both
TcIL3000_0_43640 ⚠
conserved protein, unknown function
— Both
TcIL3000_10_1740 ⚠
elongation factor 1-alpha, putative
— Both
TcIL3000_10_1730 ⚠
elongation factor 1-alpha, putative (fragment
— Both
TcIL3000_2_80 ⚠
hypothetical protein, conserved
— Both
TcIL3000_0_17180 ⚠
mitochondrial RNA binding complex 1 subunit (
— Both
TcIL3000_1_1450 ⚠
RNA editing ligase, RNA editing complex prote
— Both
TcIL3000_0_56480 ⚠
hypothetical protein (fragment)
— Both
TcIL3000_6_1250 ⚠
zinc finger protein, putative
— Both
TcIL3000_0_30260 ⚠
guide RNA associated protein, GAP2
— Both
TcIL3000_2_400 ⚠
kinetoplast polyadenylation/uridylation facto
— Both
TcIL3000_4_3570 ⚠
hypothetical protein, conserved
— Both
TcIL3000_10_11600 ⚠
60S ribosomal protein L10a, putative
— Both
TcIL3000.11.10200 ⚠
60S ribosomal protein L10a, putative
— Both
TcIL3000_0_35380 ⚠
60S ribosomal protein L10a, putative
— Both
TcIL3000_0_32710 ⚠
mitochondrial RNA binding protein 1
— Both
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Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.