TcIL3000_9_5280

pentatricopeptide repeat domain containing protein, putative
Trypanosoma congolense IL3000 OG6: OG6_138923 OG7: OG7_0018045 115 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
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Interactions 115 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
TcIL3000_0_30560 ⚠
tryptophanyl-tRNA synthetase
— OG7
TcIL3000_9_3760 ⚠
hypothetical protein
— OG7
TcIL3000_0_38820 ⚠
acidocalcisomal pyrophosphatase
— OG7
TcIL3000_3_2120 ⚠
NOL1/NOP2/sun family, putative
— OG7
TcIL3000.11.890 ⚠
Nuclear pore complex protein 158 (fragment),
— OG7
TcIL3000.11.110 ⚠
cleavage and polyadenylation specificity fact
— OG7
TcIL3000_8_2240 ⚠
tryptophanyl-tRNA synthetase, putative
— OG7
TcIL3000_10_6100 ⚠
myo-inositol-1-phosphate synthase, putative
— OG7
TcIL3000_4_620 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_10_7530 ⚠
GTPase activating protein, putative
— OG7
TcIL3000_0_43380 ⚠
UDP-glucose:glycoprotein glucosyltransferase,
— OG7
TcIL3000.11.8070 ⚠
exosome complex exonuclease RRP44p homologue
— OG7
TcIL3000.11.7660 ⚠
acidocalcisomal pyrophosphatase
— OG7
TcIL3000_5_2300 ⚠
NOL1/NOP2/sun family, putative
— OG7
TcIL3000_0_51320 ⚠
Possible lysine decarboxylase, putative
— OG7
TcIL3000_6_2120 ⚠
importin alpha subunit, putative
— OG7
TcIL3000_7_5720 ⚠
hypothetical protein, conserved
— OG7
TcIL3000.11.6180 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_10_1050 ⚠
OB-fold nucleic acid binding domain/tRNA synt
— OG7
TcIL3000_8_5170 ⚠
tyrosyl/methionyl-tRNA synthetase, putative
— OG7
TcIL3000_6_3910 ⚠
valyl-tRNA synthetase, putative
— OG7
TcIL3000_8_7960 ⚠
tRNA-dihydrouridine synthase 1, putative
— OG7
TcIL3000_10_1300 ⚠
methionyl-tRNA synthetase, putative
— OG7
TcIL3000_1_1470 ⚠
tRNA (Uracil-5-)-methyltransferase, putative
— OG7
TcIL3000_10_3340 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_6_1720 ⚠
histidyl-tRNA synthetase
— OG7
TcIL3000_10_7960 ⚠
isoleucyl-tRNA synthetase, putative (fragment
— OG7
TcIL3000_0_32980 ⚠
protein kinase, putative
— OG7
TcIL3000_10_2630 ⚠
ABC transporter, putative
— OG7
TcIL3000_0_16790 ⚠
calreticulin, putative
— OG7
TcIL3000.11.16800 ⚠
mitochondrial RNA binding protein
— OG7
TcIL3000_6_1780 ⚠
hypothetical protein, conserved (fragment)
— OG7
TcIL3000_5_3280 ⚠
MRB1 complex subunit MRB3010
— OG7
TcIL3000_8_100 ⚠
RNA-editing complex protein MP42, putative
— OG7
TcIL3000_0_37840 ⚠
RGG protein
— OG7
TcIL3000_9_1420 ⚠
KREL1
— OG7
TcIL3000_8_8330 ⚠
mitochondrial RNA binding protein 1, putative
— OG7
TcIL3000_6_1190 ⚠
hypothetical protein
— OG7
TcIL3000_0_32710 ⚠
mitochondrial RNA binding protein 1
— OG7
TcIL3000_0_56480 ⚠
hypothetical protein (fragment)
— OG7
TcIL3000_1_1450 ⚠
RNA editing ligase, RNA editing complex prote
— OG7
TcIL3000_6_1250 ⚠
zinc finger protein, putative
— OG7
TcIL3000_4_3570 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_8_6790 ⚠
translation initiation factor IF-2, putative
— OG7
TcIL3000_0_07170 ⚠
protein kinase, putative
— OG7
TcIL3000_6_250 ⚠
alanyl-tRNA synthetase, putative
— OG7
TcIL3000_8_7620 ⚠
calreticulin, putative
— OG7
TcIL3000_7_5060 ⚠
protein kinase, putative
— OG7
TcIL3000.11.3680 ⚠
leucyl-tRNA synthetase, putative
— OG7
TcIL3000_0_33070 ⚠
SET domain containing protein, putative
— OG7
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Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.