TcIL3000.11.15670

mitochondrial RNA binding complex 1 subunit, putative
Trypanosoma congolense IL3000 OG6: OG6_147456 OG7: OG7_0042910 80 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
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Interactions 80 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
TcIL3000_4_3570 ⚠
hypothetical protein, conserved
— Both
TcIL3000_9_2490
phytanoyl-CoA dioxygenase (PhyH), putative (f
— Both
TcIL3000_2_80 ⚠
hypothetical protein, conserved
— Both
TcIL3000_6_730
hypothetical protein, conserved
— Both
TcIL3000_0_17180 ⚠
mitochondrial RNA binding complex 1 subunit (
— Both
TcIL3000_2_1690 ⚠
mitochondrial RNA binding complex 1 subunit (
— Both
TcIL3000_9_1420 ⚠
KREL1
— Both
TcIL3000_8_8330 ⚠
mitochondrial RNA binding protein 1, putative
— Both
TcIL3000_0_00140 ⚠
hypothetical protein
— Both
TcIL3000_4_1010
RNA editing associated helicase 2
— OG6
TcIL3000_2_1680 ⚠
hypothetical protein, conserved (fragment)
— Both
TcIL3000_7_1190
GTP-binding protein, putative
— Both
TcIL3000_9_950
pseudouridylate synthase, putative
— Both
TcIL3000_5_4530 ⚠
hypothetical protein, conserved
— Both
TcIL3000_0_23800 ⚠
hypothetical protein (fragment)
— Both
TcIL3000_0_26660
hypothetical protein, conserved (fragment)
— Both
TcIL3000_8_3200
hypothetical protein, conserved
— Both
TcIL3000_0_30760 ⚠
hypothetical protein, conserved
— Both
TcIL3000_4_3960 ⚠
hypothetical protein, conserved
— Both
TcIL3000_4_2820 ⚠
ATP-dependent DEAH-box RNA helicase, putative
— OG6
TcIL3000_0_17500 ⚠
zinc finger CCCH domain containing protein 11
— OG7
TcIL3000_7_6070 ⚠
GTP-binding protein, putative
— OG7
TcIL3000.11.2390 ⚠
GTP-binding protein, putative
— OG7
TcIL3000_7_4310 ⚠
SpoU rRNA Methylase family, putative
— OG7
TcIL3000_7_270 ⚠
GTP-binding protein, putative
— OG7
TcIL3000.11.15760 ⚠
variant surface glycoprotein (VSG), putative
— OG7
TcIL3000_5_4930 ⚠
GTP-binding protein, putative
— OG7
TcIL3000_0_25090 ⚠
zinc finger CCCH domain containing protein 12
— OG7
TcIL3000_0_37550 ⚠
zinc finger CCCH domain containing protein 11
— OG7
TcIL3000_0_49340 ⚠
zinc finger CCCH domain containing protein 13
— OG7
TcIL3000_0_05990 ⚠
Double-stranded RNA binding motif containing
— OG6
TcIL3000_5_1510 ⚠
zinc finger CCCH domain containing protein 13
— OG7
TcIL3000_3_50 ⚠
zinc finger protein 2, putative
— OG7
TcIL3000_5_1490 ⚠
zinc finger CCCH domain containing protein 12
— OG7
TcIL3000_8_4480 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_10_4880 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_3_2910 ⚠
Domain of unknown function (DUF4379), putativ
— OG7
TcIL3000_1_1090 ⚠
conserved protein, unknown function
— Both
TcIL3000_0_43640 ⚠
conserved protein, unknown function
— Both
TcIL3000.11.6510
hypothetical protein, conserved
— Both
TcIL3000_1_1540 ⚠
40S ribosomal proteins S11, putative
— Both
TcIL3000_3_930 ⚠
hypothetical protein, conserved
— Both
TcIL3000_0_08120 ⚠
Calpain family cysteine protease, putative (f
— Both
TcIL3000_0_01940 ⚠
DEAD-box helicase, putative (fragment)
— Both
TcIL3000_5_3480 ⚠
hypothetical protein, conserved
— Both
TcIL3000_8_5670
50S ribosomal protein L17, putative
— Both
TcIL3000_3_3550
ribosomal protein L3 mitochondrial, putative
— Both
TcIL3000_10_9260
hypothetical protein, conserved
— Both
TcIL3000_10_420 ⚠
40S ribosomal proteins S11, putative
— Both
TcIL3000_10_6360
hypothetical protein, conserved
— Both
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Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.