TcIL3000_10_420

40S ribosomal proteins S11, putative
Trypanosoma congolense IL3000 OG6: OG6_100208 OG7: OG7_0003138 178 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
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Interactions 178 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
TcIL3000_3_3550 ⚠
ribosomal protein L3 mitochondrial, putative
— Both
TcIL3000_0_11290 ⚠
conserved hypothetical protein, putative (fra
— Both
TcIL3000_6_1890 ⚠
hypothetical protein, conserved
— Both
TcIL3000_0_00410 ⚠
Present in the outer mitochondrial membrane p
— Both
TcIL3000_9_3230 ⚠
GTP-binding protein, putative
— Both
TcIL3000.11.7340 ⚠
regulator of chromatin condensation, putative
— OG6
TcIL3000.11.4730 ⚠
hypothetical protein, conserved
— Both
TcIL3000.11.4740 ⚠
hypothetical protein, conserved
— Both
TcIL3000_0_05990 ⚠
Double-stranded RNA binding motif containing
— OG6
TcIL3000_4_2820 ⚠
ATP-dependent DEAH-box RNA helicase, putative
— OG6
TcIL3000.11.11760 ⚠
Leucine Rich repeats (2 copies), putative
— Both
TcIL3000.11.8460 ⚠
hypothetical protein, conserved
— Both
TcIL3000.11.2530 ⚠
Solute carrier (proton/amino acid symporter),
— Both
TcIL3000.11.14340 ⚠
Outer row dynein-assembly protein 7
— Both
TcIL3000_0_14730 ⚠
Hydin (fragment)
— Both
TcIL3000_0_49870 ⚠
kinteoplast poly(A) polymerase complex 1 subu
— Both
TcIL3000.11.10900 ⚠
hypothetical protein, conserved
— Both
TcIL3000_0_14790 ⚠
Solute carrier (proton/amino acid symporter),
— Both
TcIL3000_0_11680 ⚠
Hydin
— Both
TcIL3000.11.390 ⚠
hypothetical protein, conserved
— Both
TcIL3000_7_2180 ⚠
hypothetical protein, conserved
— Both
TcIL3000_0_14800 ⚠
hypothetical protein
— Both
TcIL3000_0_17950 ⚠
phosphatidylethanolamine-binding protein, put
— Both
TcIL3000_6_840 ⚠
hypothetical protein, conserved
— Both
TcIL3000.11.11950 ⚠
hypothetical protein, conserved
— Both
TcIL3000_4_3960 ⚠
hypothetical protein, conserved
— Both
TcIL3000_0_30760 ⚠
hypothetical protein, conserved
— Both
TcIL3000_8_3200 ⚠
hypothetical protein, conserved
— Both
TcIL3000_0_26660 ⚠
hypothetical protein, conserved (fragment)
— Both
TcIL3000_0_23800 ⚠
hypothetical protein (fragment)
— Both
TcIL3000_5_4530 ⚠
hypothetical protein, conserved
— Both
TcIL3000_9_950 ⚠
pseudouridylate synthase, putative
— Both
TcIL3000_7_3780 ⚠
60S ribosomal protein-like, putative
— Both
TcIL3000_10_6360 ⚠
hypothetical protein, conserved
— Both
TcIL3000_7_1190 ⚠
GTP-binding protein, putative
— Both
TcIL3000_0_11250 ⚠
calpain, putative (fragment)
— Both
TcIL3000_5_1930 ⚠
hypothetical protein, conserved
— Both
TcIL3000_0_25020 ⚠
hypothetical protein, conserved
— Both
TcIL3000.11.13350 ⚠
DEAD-box helicase, putative
— Both
TcIL3000_0_14580 ⚠
calpain, putative (fragment)
— Both
TcIL3000.11.1030 ⚠
cysteine peptidase, Clan CA, family C2, putat
— Both
TcIL3000_0_05440 ⚠
calpain, putative (fragment)
— Both
TcIL3000_10_240 ⚠
hypothetical protein, conserved
— Both
TcIL3000_8_6400 ⚠
SpoU rRNA Methylase family, putative
— Both
TcIL3000_8_5670 ⚠
50S ribosomal protein L17, putative
— Both
TcIL3000_10_12820 ⚠
RNA binding protein, putative
— OG7
TcIL3000_0_37550 ⚠
zinc finger CCCH domain containing protein 11
— OG7
TcIL3000.11.6920 ⚠
60S ribosomal protein L24, putative
— OG7
TcIL3000_4_540 ⚠
50S ribosomal protein L14, putative
— OG7
TcIL3000_0_25090 ⚠
zinc finger CCCH domain containing protein 12
— OG7
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Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.