TcIL3000_10_12820

RNA binding protein, putative
Trypanosoma congolense IL3000 OG6: OG6_157061 OG7: OG7_0028950 52 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
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Interactions 52 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
TcIL3000_8_1290 ⚠
hypothetical protein
— OG7
TcIL3000_10_3970 ⚠
phosphatidylinositol-4-phosphate 5-kinase, pu
— OG7
TcIL3000_7_340 ⚠
Nucleolar protein 105, putative
— OG7
TcIL3000.11.3660 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_0_36850 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_0_55990 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_1_1540 ⚠
40S ribosomal proteins S11, putative
— OG7
TcIL3000_10_420 ⚠
40S ribosomal proteins S11, putative
— OG7
TcIL3000_0_41070 ⚠
Ribosomal protein S7p/S5e, putative
— OG7
TcIL3000.11.6850 ⚠
40S ribosomal protein S5, putative
— OG7
TcIL3000_7_4100 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_0_41060 ⚠
40S ribosomal protein S5, putative
— OG7
TcIL3000.11.6840 ⚠
40S ribosomal protein S5, putative
— OG7
TcIL3000_10_2790 ⚠
major facilitator superfamily, putative
— OG7
TcIL3000_5_4040 ⚠
ATP-dependent DEAD/H RNA helicase, putative
— OG7
TcIL3000_10_5710 ⚠
ATP-dependent RNA helicase DBP2A, putative
— OG7
TcIL3000_8_3710 ⚠
mitochondrial, ATP-dependent DEAD/H RNA helic
— OG7
TcIL3000_0_04480 ⚠
ATP-dependent DEAD/H RNA helicase, putative
— OG7
TcIL3000.11.9180 ⚠
DEAD-box ATP-dependent RNA helicase, mitochon
— OG7
TcIL3000_8_1270 ⚠
ATP-dependent RNA helicase DBP2B, putative
— OG7
TcIL3000_10_12440 ⚠
ATP-dependent RNA helicase HEL67
— OG7
TcIL3000_0_15340 ⚠
protein kinase A regulatory subunit
— OG7
TcIL3000.11.16130 ⚠
cAMP response protein 1, putative
— OG7
TcIL3000.11.4690 ⚠
protein kinase A regulatory subunit
— OG7
TcIL3000_4_80 ⚠
Double RNA binding domain protein 7
— OG7
TcIL3000_10_1850 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_0_43020 ⚠
hypothetical protein (fragment)
— Both
TcIL3000_4_1640
eukaryotic translation initiation factor 3 su
— OG6
TcIL3000_6_1580 ⚠
spliceosome-associated protein, putative
— Both
TcIL3000_0_17140 ⚠
2-oxoglutarate dehydrogenase E1 component, pu
— Both
TcIL3000.11.10480 ⚠
2-oxoglutarate dehydrogenase E1 component, pu
— Both
TcIL3000.11.1340 ⚠
2-oxoglutarate dehydrogenase subunit, putativ
— Both
TcIL3000_10_11630 ⚠
RBP12, RNA-binding protein, putative
— Both
TcIL3000_0_35380 ⚠
60S ribosomal protein L10a, putative
— Both
TcIL3000_8_550
RNA-binding protein, putative
— OG6
TcIL3000.11.10200 ⚠
60S ribosomal protein L10a, putative
— Both
TcIL3000_10_12810 ⚠
RNA binding protein, putative
— Both
TcIL3000_5_2520 ⚠
eukaryotic translation initiation factor 3 su
— Both
TcIL3000_10_11870 ⚠
hypothetical protein, conserved
— Both
TcIL3000_3_2670 ⚠
hypothetical protein, conserved
— Both
TcIL3000_0_39530 ⚠
splicing factor TSR1
— Both
TcIL3000_10_11600 ⚠
60S ribosomal protein L10a, putative
— Both
TcIL3000_10_4810 ⚠
N-acetyltransferase subunit Nat1, putative
— Both
TcIL3000_10_2380 ⚠
eukaryotic translation initiation factor 5, p
— Both
TcIL3000_6_3790 ⚠
eukaryotic translation initiation factor 3 su
— Both
TcIL3000_0_56050 ⚠
ATP-dependent DEAD/H RNA helicase, putative
— Both
TcIL3000_0_23760 ⚠
zinc finger protein family member, putative
— OG7
TcIL3000_7_2990 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_0_37770 ⚠
RNA binding protein, putative
— OG7
TcIL3000_4_1190 ⚠
phosphatidylinositol phosphate kinase alpha
— OG7
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Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.