TcIL3000_6_3790

eukaryotic translation initiation factor 3 subunit d
Trypanosoma congolense IL3000 OG6: OG6_102252 OG7: OG7_0006808 62 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
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Interactions 62 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
TcIL3000_5_2520
eukaryotic translation initiation factor 3 su
— +2 more Both
TcIL3000.11.10110 ⚠
eukaryotic translation initiation factor 3 su
— Both
TcIL3000_0_29860
eukaryotic translation initiation factor, put
— Both
TcIL3000_4_1640
eukaryotic translation initiation factor 3 su
— OG6
TcIL3000_10_7150
eukaryotic translation initiation factor 3 su
— Both
TcIL3000_10_3850
eukaryotic translation initiation factor 3 su
— Both
TcIL3000.11.1580 ⚠
Serine-threonine kinase receptor-associated p
— OG7
TcIL3000_0_20520 ⚠
eukaryotic translation initiation factor 3 su
— Both
TcIL3000.11.1340 ⚠
2-oxoglutarate dehydrogenase subunit, putativ
— Both
TcIL3000_10_4810
N-acetyltransferase subunit Nat1, putative
— Both
TcIL3000_3_3070
hypothetical protein, conserved
— Both
TcIL3000_3_770
Eukaryotic translation initiation factor 3 su
— Both
TcIL3000_10_11600 ⚠
60S ribosomal protein L10a, putative
— Both
TcIL3000_9_360 ⚠
hypothetical protein (fragment)
— Both
TcIL3000_9_350 ⚠
Zn-finger in Ran binding protein and others/S
— Both
TcIL3000_0_08010
hypothetical protein, conserved
— OG7
TcIL3000_8_1290 ⚠
hypothetical protein
— OG7
TcIL3000.11.14700
hypothetical protein, conserved
— OG7
TcIL3000_5_4040 ⚠
ATP-dependent DEAD/H RNA helicase, putative
— OG7
TcIL3000_10_12820 ⚠
RNA binding protein, putative
— Both
TcIL3000_10_5710 ⚠
ATP-dependent RNA helicase DBP2A, putative
— OG7
TcIL3000_8_3710 ⚠
mitochondrial, ATP-dependent DEAD/H RNA helic
— OG7
TcIL3000_0_04480 ⚠
ATP-dependent DEAD/H RNA helicase, putative
— OG7
TcIL3000_10_12810 ⚠
RNA binding protein, putative
— OG7
TcIL3000.11.9180 ⚠
DEAD-box ATP-dependent RNA helicase, mitochon
— OG7
TcIL3000_8_1270 ⚠
ATP-dependent RNA helicase DBP2B, putative
— OG7
TcIL3000_10_12440 ⚠
ATP-dependent RNA helicase HEL67
— OG7
TcIL3000.11.320
repressor activator protein 1
— OG7
TcIL3000.11.4110
hypothetical protein, conserved
— OG7
TcIL3000_7_2490
hypothetical protein, conserved
— OG7
TcIL3000_9_4030 ⚠
pre-RNA processing PIH1/Nop17, putative
— OG7
TcIL3000_9_1710 ⚠
glutaminyl-tRNA synthetase, putative
— OG7
TcIL3000_8_1770 ⚠
Sec7 domain containing protein, putative
— OG7
TcIL3000_10_3170
hypothetical protein, conserved
— OG7
TcIL3000.11.14080
eukaryotic translation initiation factor 3 su
— Both
TcIL3000_10_10950 ⚠
pre-RNA processing PIH1/Nop17, putative
— Both
TcIL3000.11.12560
Coatomer subunit gamma
— Both
TcIL3000_6_1580
spliceosome-associated protein, putative
— Both
TcIL3000_0_09090
hypothetical protein, conserved
— Both
TcIL3000_4_1950 ⚠
Sec7 domain containing protein, putative
— Both
TcIL3000_0_04520 ⚠
Tripartite attachment complex protein 102
— Both
TcIL3000_0_53530 ⚠
tRNA synthetases class I (E and Q), anti-codo
— Both
TcIL3000_0_30090 ⚠
glutamyl-tRNA synthetase, putative (fragment)
— Both
TcIL3000_0_04530 ⚠
hypothetical protein
— Both
TcIL3000_6_4040 ⚠
glutamyl-tRNA synthetase, putative
— Both
TcIL3000_10_4890
translation elongation factor 1-beta, putativ
— Both
TcIL3000.11.15960
CS domain/TPR repeat/Tetratricopeptide repeat
— Both
TcIL3000_6_3820
kinesin, putative
— OG6
TcIL3000_0_39530 ⚠
splicing factor TSR1
— Both
TcIL3000_8_2740
hypothetical protein, conserved (fragment)
— Both
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Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.