TcIL3000_10_4890

translation elongation factor 1-beta, putative
Trypanosoma congolense IL3000 OG6: OG6_101695 OG7: OG7_0003992 69 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
Applies on "Apply filters".
Reset
⬇ CSV
Network view all shared interactors, plus up to 150 more
Show:
Selection: Shift+drag also box-selects. Drag any selected node to move the whole selection.
Interactions 69 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
TcIL3000.11.13470 ⚠
elongation factor 1 gamma, putative
— +8 more Both
TcIL3000_0_43470 ⚠
elongation factor 1 gamma, putative
— +8 more Both
TcIL3000.11.13550 ⚠
elongation factor 1 gamma, putative
— +8 more Both
TcIL3000_6_380 ⚠
hypothetical protein, conserved
— +2 more OG7
TcIL3000.11.11980 ⚠
heat shock protein 70, putative
— OG6
TcIL3000_9_350 ⚠
Zn-finger in Ran binding protein and others/S
— Both
TcIL3000_9_360 ⚠
hypothetical protein (fragment)
— Both
TcIL3000_3_770
Eukaryotic translation initiation factor 3 su
— Both
TcIL3000.11.620 ⚠
RNA polymerase I second largest subunit (frag
— Both
TcIL3000_0_40200 ⚠
heat shock 70 kDa protein, putative
— OG6
TcIL3000_0_40210 ⚠
heat shock 70 kDa protein, putative (fragment
— OG6
TcIL3000_8_3450
glycerol-3-phosphate dehydrogenase [NAD+], gl
— Both
TcIL3000.11.610 ⚠
RNA polymerase I second largest subunit (frag
— Both
TcIL3000_0_32940 ⚠
DNA-directed RNA polymerase II subunit 2, put
— OG7
TcIL3000.11.16410
hypothetical protein, conserved
— Both
TcIL3000_10_6420 ⚠
Ribosomal RNA processing protein 41A
— Both
TcIL3000.11.11940 ⚠
heat shock 70 kDa protein, putative
— OG6
TcIL3000_5_1110
exosome component CSL4, putative
— Both
TcIL3000.11.11990 ⚠
luminal binding protein 1 (BiP), putative
— OG6
TcIL3000_3_380
Conserved hypothetical ATP binding protein, p
— Both
TcIL3000_6_1480 ⚠
aspartyl-tRNA synthetase, putative
— OG7
TcIL3000_0_51360 ⚠
RNA polymerase beta subunit/RNA polymerase Rp
— OG7
TcIL3000_3_560
hypothetical protein, conserved
— Both
TcIL3000_0_29100 ⚠
DNA-directed RNA polymerase II subunit 2, put
— OG7
TcIL3000_1_120 ⚠
DNA-directed RNA polymerase III, putative
— OG7
TcIL3000_0_54840 ⚠
ribosomal RNA processing protein 41B, putativ
— OG7
TcIL3000_10_1050 ⚠
OB-fold nucleic acid binding domain/tRNA synt
— OG7
TcIL3000_4_3350 ⚠
DNA-directed RNA polymerase II subunit 2, put
— OG7
TcIL3000.11.11750 ⚠
exosome-associated protein 4
— OG7
TcIL3000_8_1770 ⚠
Sec7 domain containing protein, putative
— OG7
TcIL3000_0_35800 ⚠
Domain of unknown function (DUF4486), putativ
— OG7
TcIL3000_0_38390 ⚠
Domain of unknown function (DUF4486), putativ
— OG7
TcIL3000_9_1710 ⚠
glutaminyl-tRNA synthetase, putative
— OG7
TcIL3000.11.4110
hypothetical protein, conserved
— OG7
TcIL3000_10_3170
hypothetical protein, conserved
— OG7
TcIL3000_2_1300
hypothetical protein, conserved (fragment)
— OG7
TcIL3000_0_34090 ⚠
Transport protein Trs120 or TRAPPC9, TRAPP II
— Both
TcIL3000_10_7150
eukaryotic translation initiation factor 3 su
— Both
TcIL3000_0_17200 ⚠
ZFP family member, putative (fragment)
— Both
TcIL3000_10_6820
methyltransferase, putative
— Both
TcIL3000_0_54370
transmembrane protein, conserved
— Both
TcIL3000.11.2500
hypothetical protein, conserved
— Both
TcIL3000_4_1950 ⚠
Sec7 domain containing protein, putative
— Both
TcIL3000_1_1340
exosome-associated protein 1, putative
— Both
TcIL3000_6_3790
eukaryotic translation initiation factor 3 su
— Both
TcIL3000_4_820 ⚠
hypothetical protein
— Both
TcIL3000_3_720 ⚠
ER-golgi trafficking TRAPP I complex 85 kDa s
— Both
TcIL3000_0_34100 ⚠
hypothetical protein, conserved (fragment)
— Both
TcIL3000.11.12560
Coatomer subunit gamma
— Both
TcIL3000_1_1330
coatomer beta subunit, putative
— Both
Page 1 of 2
Next →
Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.