TcIL3000_7_70

ribosome biogenesis protein, putative
Trypanosoma congolense IL3000 OG6: OG6_102220 OG7: OG7_0007289 56 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
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Interactions 56 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
TcIL3000_10_13320 ⚠
ABC transporter, putative
— OG7
TcIL3000.11.3070 ⚠
mitochondrial DNA polymerase I protein D, put
— Both
TcIL3000_9_990
endo-beta-N-acetylglucosaminidase, putative
— Both
TcIL3000_10_11370 ⚠
hypothetical protein, conserved
— Both
TcIL3000_0_15650 ⚠
mitochondrial DNA polymerase I protein D, put
— Both
TcIL3000_7_4470
lipin, putative (fragment)
— Both
TcIL3000_6_3820
kinesin, putative
— OG6
TcIL3000_10_2630 ⚠
ABC transporter, putative
— Both
TcIL3000_0_04870 ⚠
ubiquitin carboxyl-terminal hydrolase, putati
— Both
TcIL3000_10_11380 ⚠
hypothetical protein, conserved
— Both
TcIL3000.11.15150 ⚠
Paraflagellar Rod Proteome Component 9, putat
— Both
TcIL3000.11.14360
nuclear RNA binding domain
— Both
TcIL3000_0_44980
class I transcription factor A, subunit 1
— Both
TcIL3000.11.3440 ⚠
Dpy-30 motif containing protein, putative
— OG7
TcIL3000.11.8730
hypothetical protein, conserved
— Both
TcIL3000_3_1800 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_0_46520 ⚠
RNA-editing complex protein
— OG7
TcIL3000_10_9180 ⚠
ATP-binding cassette sub-family F member 1, p
— OG7
TcIL3000_0_47810 ⚠
ubiquitin carboxyl-terminal hydrolase, putati
— OG7
TcIL3000_0_00160 ⚠
kinetoplast poly(A) polymerase 1
— OG7
TcIL3000_0_36870 ⚠
Paraflagellar Rod Proteome Component 9, putat
— OG7
TcIL3000_0_60760 ⚠
mitochondrial DNA polymerase I protein B (fra
— OG7
TcIL3000.11.4800 ⚠
mitochondrial DNA polymerase I protein B, put
— OG7
TcIL3000.11.8500 ⚠
kinetoplast poly(A) polymerase 1
— OG7
TcIL3000_7_1050 ⚠
RNA editing complex MP57, putative, RNA editi
— OG7
TcIL3000_0_31970 ⚠
ubiquitin carboxyl-terminal hydrolase, putati
— OG7
TcIL3000_0_60750 ⚠
hypothetical protein
— OG7
TcIL3000_2_1140 ⚠
EMG1/NEP1 methyltransferase, putative
— OG7
TcIL3000_0_47220 ⚠
class I transcription factor A, subunit 6
— Both
TcIL3000_10_12550
ribosome biogenesis protein, putative
— Both
TcIL3000_0_17580
hypothetical protein, conserved
— Both
TcIL3000.11.15190 ⚠
pumilio/PUF RNA binding protein 7, putative
— Both
TcIL3000_0_17930 ⚠
Pumilio-family RNA binding repeat, putative
— Both
TcIL3000_10_7090
Ribosomal protein L1p/L10e family, putative
— Both
TcIL3000_8_2740
hypothetical protein, conserved (fragment)
— Both
TcIL3000_0_37600 ⚠
Nucleolar protein 111, putative
— Both
TcIL3000_0_40600 ⚠
KRI1-like family C-terminal, putative
— Both
TcIL3000_8_4790 ⚠
EMG1/NEP1 methyltransferase, putative
— Both
TcIL3000_9_6280
rRNA processing protein, putative
— Both
TcIL3000_6_1710
ribosome biogenesis regulatory protein (RRS1)
— Both
TcIL3000.11.1450
cysteine desulfurase, putative
— Both
TcIL3000_5_710 ⚠
class I transcription factor A, subunit 6
— Both
TcIL3000_0_44960
class I transcription factor A, subunit 3 (fr
— Both
TcIL3000_2_860 ⚠
Dpy-30 motif containing protein, putative (fr
— Both
TcIL3000_2_870 ⚠
hypothetical protein, conserved (fragment)
— Both
TcIL3000_0_30150 ⚠
hypothetical protein, conserved (fragment)
— Both
TcIL3000_5_1940
GMP reductase
— Both
TcIL3000_3_1730
peter pan protein, putative
— Both
TcIL3000_0_42510
aspartyl aminopeptidase, putative
— Both
TcIL3000_10_6290 ⚠
terminal uridylyltransferase 3, putative
— Both
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Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.