TcIL3000_9_5900

proteasome complex subunit Rpn13 ubiquitin receptor, putative
Trypanosoma congolense IL3000 OG6: OG6_389806 OG7: OG7_0006970 74 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
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Interactions 74 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
TcIL3000_3_1280 ⚠
translation elongation factor EF-2, putative
— OG7
TcIL3000_0_58160 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_10_7430 ⚠
Galactose oxidase, central domain containing
— OG7
TcIL3000_0_25450 ⚠
SPRY domain containing protein, putative (fra
— OG7
TcIL3000_0_36040 ⚠
proteasome alpha 7 subunit
— OG7
TcIL3000_0_22030 ⚠
Galactose oxidase, central domain containing
— OG7
TcIL3000_10_4920 ⚠
Galactose oxidase, central domain containing
— OG7
TcIL3000_10_5090 ⚠
proteasome subunit alpha type-1, putative
— OG7
TcIL3000.11.9770 ⚠
Galactose oxidase, central domain containing
— OG7
TcIL3000_0_25030 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_8_5980 ⚠
Galactose oxidase, central domain/Kelch motif
— OG7
TcIL3000_0_00160 ⚠
kinetoplast poly(A) polymerase 1
— OG7
TcIL3000_8_5130 ⚠
WW domain containing protein, putative
— OG7
TcIL3000_0_33740 ⚠
dynein light chain p28, axonemal, putative
— OG7
TcIL3000_10_90 ⚠
proteasome subunit alpha type-5, putative
— OG7
TcIL3000_8_2060 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_10_7240 ⚠
Concanavalin A-like lectin/glucanases superfa
— OG7
TcIL3000_5_4430 ⚠
Galactose oxidase, central domain/Domain of u
— OG7
TcIL3000_0_32360 ⚠
Midasin, putative (fragment)
— OG7
TcIL3000_6_1870 ⚠
ubiquitin-protein ligase, putative
— OG7
TcIL3000.11.3970 ⚠
BTB/POZ domain/Galactose oxidase, central dom
— OG7
TcIL3000_7_1050 ⚠
RNA editing complex MP57, putative, RNA editi
— OG7
TcIL3000_10_3760 ⚠
elongation factor 2, putative
— OG7
TcIL3000_10_150 ⚠
proteasome alpha 2 subunit, putative
— OG7
TcIL3000.11.8500 ⚠
kinetoplast poly(A) polymerase 1
— OG7
TcIL3000_0_11960 ⚠
HECT-domain (ubiquitin-transferase), putative
— OG7
TcIL3000_0_55120 ⚠
hypothetical protein
— OG7
TcIL3000_1_320 ⚠
kelch domain-containing protein
— OG7
TcIL3000_0_38710 ⚠
ubiquitin-protein ligase, putative
— OG7
TcIL3000_8_5530 ⚠
proteasome 26S non-ATPase subunit 9, putative
— OG7
TcIL3000_1_370 ⚠
Midasin, putative
— OG7
TcIL3000_10_12830 ⚠
intraflagellar transport protein 52
— OG7
TcIL3000_7_3640 ⚠
proteasome alpha 3 subunit, putative
— OG7
TcIL3000.11.1530 ⚠
intraflagellar transport protein 88, putative
— OG7
TcIL3000_6_2060 ⚠
hypothetical protein, conserved (fragment)
— OG7
TcIL3000_8_1450 ⚠
ubiquitin-protein ligase, putative
— OG7
TcIL3000_10_12370 ⚠
intraflagellar transport protein 140, putativ
— OG7
TcIL3000_10_5680 ⚠
chaperone protein DnaJ, putative
— OG7
TcIL3000_2_370 ⚠
serine peptidase, putative, ATP-dependent Clp
— OG7
TcIL3000_2_1650 ⚠
chaperone protein ClpB1, putative
— OG7
TcIL3000_2_1630 ⚠
chaperone protein ClpB1, putative
— OG7
TcIL3000_10_2740 ⚠
DnaJ domain/Transmembrane Fragile-X-F protein
— OG7
TcIL3000_0_15550 ⚠
chaperone protein DnaJ, putative
— OG7
TcIL3000_10_1900 ⚠
chaperone protein DNAj, putative (fragment)
— OG7
TcIL3000_2_1270 ⚠
chaperone protein DnaJ, putative
— OG7
TcIL3000_9_2840 ⚠
chaperone protein DnaJ, putative
— OG7
TcIL3000_9_5260 ⚠
chaperone protein DNAj, putative (fragment)
— OG7
TcIL3000.11.7960 ⚠
glycerol-3-phosphate dehydrogenase (FAD-depen
— OG7
TcIL3000.11.16670 ⚠
T-complex protein 1, alpha subunit, putative
— +4 more OG7
TcIL3000.11.1600 ⚠
T-complex protein 1, beta subunit, putative (
— +4 more OG7
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Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.