TvY486_1006390

DNA mismatch repair protein MSH6, putative
Trypanosoma vivax Y486 OG6: OG6_100652 OG7: OG7_0001337 23 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
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Interactions 23 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
TvY486_0703950 ⚠
RNA-editing complex protein, (fragment), RNA-
— OG7
TvY486_1108690 ⚠
kinetoplast poly(A) polymerase 1
— OG7
TvY486_0006340 ⚠
elongation factor 1-alpha, putative (fragment
— OG7
TvY486_0804950 ⚠
ubiquitin fold modifier protein, putative
— OG7
TvY486_1106510 ⚠
eukaryotic release factor 3, putative
— OG7
TvY486_1002080 ⚠
elongation factor 1-alpha, putative
— OG7
TvY486_0701340 ⚠
RET2, RNA editing complex MP57, putative, RNA
— OG7
TvY486_1002090 ⚠
elongation factor 1-alpha, putative (fragment
— OG7
TvY486_1007150 ⚠
terminal uridylyltransferase 3, putative, (fr
— OG7
TvY486_0904800 ⚠
elongation factor 1-alpha, putative
— OG7
TvY486_1111980 ⚠
Calponin homology (CH) domain containing prot
— OG7
TvY486_1002100 ⚠
elongation factor 1-alpha, putative
— OG7
TvY486_1010650 ⚠
DNA mismatch repair protein MSH2, putative (f
— Both
TvY486_0100870 ⚠
Replication Factor C Subunit 1-related protei
— OG7
TvY486_1110160 ⚠
replication factor C, subunit 4, putative
— OG7
TvY486_0905840 ⚠
replication factor C, subunit 3, putative
— OG7
TvY486_1110130 ⚠
replication factor C, subunit 4, putative
— OG7
TvY486_0706520 ⚠
ATPase family associated with various cellula
— OG7
TvY486_0044030 ⚠
replication factor C, subunit 4, putative
— OG7
TvY486_0023700 ⚠
replication factor C, subunit 4, putative
— OG7
TvY486_1007860 ⚠
replication factor C subunit 3, putative
— OG7
TvY486_1105870 ⚠
replication factor C, subunit 1, putative
— Both
TvY486_0603360 ⚠
replication factor C, subunit 2, putative
— Both
Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.