TvY486_1107790

DNA-direcetd RNA polymerase II, subunit 9, putative
Trypanosoma vivax Y486 OG6: OG6_102455 OG7: OG7_0002891 40 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
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Interactions 40 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
TvY486_1012900 ⚠
DNA-directed RNA polymerase I subunit RPB5z,
— OG7
TvY486_1100480 ⚠
RNA polymerase I second largest subunit, puta
— OG7
TvY486_1014740 ⚠
DNA-directed RNA polymerases I and III subuni
— OG7
TvY486_0902520 ⚠
hypothetical protein, conserved
— OG7
TvY486_0800900 ⚠
RAVE protein 1 C terminal, putative
— OG7
TvY486_0600150 ⚠
hypothetical protein, conserved (fragment)
— OG7
TvY486_0902970 ⚠
hypothetical protein, conserved (fragment)
— OG7
TvY486_0800550 ⚠
DNA polymerase sigma, putative
— OG7
TvY486_0701210 ⚠
DNA polymerase sigma-like protein, putative
— OG7
TvY486_1111590 ⚠
glycosyl hydrolase, putative
— OG7
TvY486_0804650 ⚠
DNA-directed rna polymerase I largest subunit
— OG7
TvY486_0101160 ⚠
histone H3, putative
— OG7
TvY486_1014720 ⚠
histone H3 variant V
— OG7
TvY486_0101190 ⚠
histone H3, putative
— OG7
TvY486_0101170 ⚠
histone H3, putative
— OG7
TvY486_1114090 ⚠
DNA-directed RNA polymerase III subunit, puta
— OG7
TvY486_1004110 ⚠
hypothetical protein, conserved (fragment)
— OG7
TvY486_0902710 ⚠
exosome complex exonuclease RRP40, putative
— OG7
TvY486_0701174 ⚠
hypothetical protein, conserved
— OG7
TvY486_0604140 ⚠
protein mkt1, putative
— OG7
TvY486_1108660 ⚠
RNA polymerase B subunit RPB8, putative
— Both
TvY486_0404370 ⚠
RNA polymerase IIA largest subunit, (fragment
— Both
TvY486_0403520 ⚠
DNA-directed RNA polymerase II subunit 2, put
— Both
TvY486_1109400 ⚠
DNA-dependent RNA polymerases, putative
— Both
TvY486_0806890 ⚠
RNA polymerase IIA largest subunit, (fragment
— Both
TvY486_0300630 ⚠
DNA-directed RNA polymerase I subunit RPB10,
— Both
TvY486_1002800 ⚠
DNA-directed RNA polymerase III subunit C1, p
— Both
TvY486_0304650 ⚠
hypothetical protein, conserved
— Both
TvY486_0100010 ⚠
DNA-directed RNA polymerase III, putative (fr
— Both
TvY486_0304910 ⚠
DNA-directed RNA polymerase II subunit 3, put
— Both
TvY486_1115230 ⚠
RNA polymerase-like protein, putative
— Both
TvY486_0403280 ⚠
DNA-directed RNA polymerase subunit, putative
— Both
TvY486_0034450 ⚠
hypothetical protein, conserved in T. vivax
— OG6
TvY486_1100070 ⚠
DNA-directed RNA polymerase subunit, putative
— Both
TvY486_1012910 ⚠
DNA-directed RNA polymerases II subunit, puta
— Both
TvY486_1102220 ⚠
DNA-directed RNA polymerase II, putative
— Both
TvY486_0501420 ⚠
Galactose oxidase, central domain/Kelch motif
— OG7
TvY486_0101220 ⚠
exosome-associated protein 1, putative
— OG7
TvY486_0002850 ⚠
hypothetical protein, conserved (fragment)
— OG7
TvY486_0807380 ⚠
hypothetical protein, conserved
— OG7
Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.