LINF_040006300

exosome complex exonuclease RRP40 - putative
Leishmania infantum JPCM5 OG6: OG6_102463 OG7: OG7_0007513 163 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
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Interactions 163 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
LINF_020008200 ⚠
RNase PH-like protein - putative
— Both
LINF_360038200 ⚠
exosome complex exonuclease RRP41A
— Both
LINF_200018800
RNasePH-like protein
— Both
LINF_360058400 ⚠
exosome-associated protein 4 - putative
— OG7
LINF_200005000 ⚠
DNA-directed RNA polymerase II subunit 2 - pu
— OG7
LINF_310006600 ⚠
DNA-directed RNA polymerase II subunit 2 - pu
— OG7
LINF_250011500 ⚠
RNA polymerase I second largest subunit - put
— Both
LINF_140005000
exosome complex exonuclease - putative
— Both
LINF_220022100 ⚠
exosome complex exonuclease RRP45 homolog - p
— +2 more Both
LINF_230024800
exosome component CSL4 - putative
— Both
LINF_320042100 ⚠
exosome-associated protein 2 - putative
— +2 more Both
LINF_360079500 ⚠
adaptin complex 1 subunit - putative
— OG7
LINF_110017600
protein transport protein SEC31 - putative
— Both
LINF_250018800
hypothetical protein - conserved
— Both
LINF_250020100 ⚠
Conserved hypothetical ATP binding protein -
— Both
LINF_030008300
protein kinase - putative
— Both
LINF_360020500 ⚠
translation elongation factor 1-beta - putati
— Both
LINF_340014200 ⚠
elongation factor 1-beta
— Both
LINF_340014000 ⚠
elongation factor 1-beta
— Both
LINF_260009800 ⚠
Conserved hypothetical ATP binding protein -
— OG7
LINF_090008100 ⚠
DNA replication licensing factor MCM4 - puta
— OG7
LINF_330036300 ⚠
DNA replication licensing factor MCM3 - putat
— OG7
LINF_330028000 ⚠
phosphoribosylpyrophosphate synthetase - puta
— OG7
LINF_210021500 ⚠
RecF/RecN/SMC N terminal domain/SMC proteins
— OG7
LINF_160005200 ⚠
Holliday junction DNA helicase ruvB N-terminu
— OG7
LINF_320020300 ⚠
phosphatidylinositol 3-related kinase - putat
— OG7
LINF_310034200 ⚠
RNA polymerase ii largest subunit
— OG7
LINF_360043900 ⚠
polyubiquitin - putative
— OG7
LINF_240029100 ⚠
cullin-like protein-like protein
— OG7
LINF_260017600 ⚠
hypothetical protein - conserved
— OG7
LINF_230026400 ⚠
neutral sphingomyelinase activation associate
— OG7
LINF_360011600 ⚠
ubiquitin/ribosomal protein S27a - putative
— OG7
LINF_310028300 ⚠
ubiquitin-fusion protein
— OG7
LINF_140018100 ⚠
ras-like small GTPases - putative
— OG7
LINF_180008700 ⚠
tubulin tyrosine ligase protein - putative
— OG7
LINF_110008900 ⚠
tubulin-tyrsoine ligase-like protein
— OG7
LINF_330037100 ⚠
Concanavalin A-like lectin/glucanases superfa
— OG7
LINF_320019300 ⚠
RNA guanylyltransferase - putative
— OG7
LINF_290025700 ⚠
dihydrolipoamide dehydrogenase - putative
— OG7
LINF_360019700 ⚠
adenylate kinase - putative
— OG7
LINF_320019700 ⚠
ATP-dependent DNA DEAD/DEAH box helicase - pu
— OG7
LINF_360063600 ⚠
phosphoribosylpyrophosphate synthetase - puta
— OG7
LINF_360049000 ⚠
hypothetical protein
— OG7
LINF_280030800 ⚠
DNA replication licensing factor MCM6 - putat
— OG7
LINF_270033100 ⚠
tubulin-tyrosine ligase-like protein
— OG7
LINF_350048400 ⚠
predicted zinc finger protein
— OG7
LINF_310034600 ⚠
acetoin dehydrogenase e3 component-like prote
— OG7
LINF_300040000 ⚠
protein mkt1 - putative
— OG7
LINF_050009000 ⚠
structural maintenance of chromosome (SMC) -
— OG7
LINF_180011100 ⚠
Zn-finger in Ran binding protein and others/F
— OG7
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Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.