LINF_220022100

exosome complex exonuclease RRP45 homolog - putative
Leishmania infantum JPCM5 OG6: OG6_100420 OG7: OG7_0002825 66 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
Applies on "Apply filters".
Reset
⬇ CSV
Network view all shared interactors, plus up to 150 more
Show:

Selection: Shift+drag also box-selects. Drag any selected node to move the whole selection.
Interactions 66 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
LINF_140005000 ⚠
exosome complex exonuclease - putative
— +4 more Both
LINF_020008200 ⚠
RNase PH-like protein - putative
— +2 more Both
LINF_040006300 ⚠
exosome complex exonuclease RRP40 - putative
— +2 more Both
LINF_340037900 ⚠
exosome subunit rrp6p homologue - putative
— Both
LINF_360058400 ⚠
exosome-associated protein 4 - putative
— OG7
LINF_340037400 ⚠
exosome subunit rrp6p homologue - putative
— Both
LINF_360038200 ⚠
exosome complex exonuclease RRP41A
— +2 more Both
LINF_230024800 ⚠
exosome component CSL4 - putative
— Both
LINF_110007300 ⚠
proteasome alpha 7 subunit - putative
— Both
LINF_280006000 ⚠
proteasome beta 3 subunit - putative
— Both
LINF_340014000 ⚠
elongation factor 1-beta
— Both
LINF_340014200 ⚠
elongation factor 1-beta
— Both
LINF_360020500 ⚠
translation elongation factor 1-beta - putati
— Both
LINF_350028000 ⚠
ATP-dependent RNA helicase-like protein
— OG6
LINF_110007500 ⚠
hypothetical protein - conserved
— Both
LINF_010010700 ⚠
pre-mRNA processing factor 3 (PRP3)/Protein o
— Both
LINF_350043800 ⚠
proteasome beta 2 subunit - putative
— Both
LINF_290021000 ⚠
hypothetical protein - conserved
— Both
LINF_340034000 ⚠
hypothetical protein - conserved
— Both
LINF_320042100 ⚠
exosome-associated protein 2 - putative
— Both
LINF_210026800 ⚠
proteasome alpha 2 subunit - putative
— Both
LINF_200005000 ⚠
DNA-directed RNA polymerase II subunit 2 - pu
— OG7
LINF_260009800 ⚠
Conserved hypothetical ATP binding protein -
— OG7
LINF_310006600 ⚠
DNA-directed RNA polymerase II subunit 2 - pu
— OG7
LINF_270019000 ⚠
T-complex protein 1 - beta subunit - putative
— OG7
LINF_270006800 ⚠
proteasome alpha 7 subunit - putative
— OG7
LINF_360022300 ⚠
proteasome subunit alpha type-1 - putative
— OG7
LINF_210028100 ⚠
proteasome subunit alpha type-5 - putative
— OG7
LINF_130022100 ⚠
chaperonin TCP20 - putative
— OG7
LINF_190011500 ⚠
DNA-directed RNA polymerases I and III subuni
— OG7
LINF_140008100 ⚠
proteasome alpha 3 subunit - putative
— OG7
LINF_360081100 ⚠
T-complex protein 1 - theta subunit - putativ
— OG7
LINF_350044000 ⚠
T-complex protein 1 - eta subunit - putative
— OG7
LINF_360038000 ⚠
ATP-dependent RNA helicase - putative
— OG7
LINF_080010200 ⚠
ribose-phosphate pyrophosphokinase - putative
— OG7
LINF_300018400 ⚠
hypothetical protein - conserved
— Both
LINF_180019100 ⚠
heat shock protein 110 - putative
— OG6
LINF_320037000 ⚠
ATP binding protein-like protein
— Both
LINF_270029200 ⚠
Phosducin/Thioredoxin - putative
— Both
LINF_250011500 ⚠
RNA polymerase I second largest subunit - put
— Both
LINF_250018800 ⚠
hypothetical protein - conserved
— Both
LINF_250020100 ⚠
Conserved hypothetical ATP binding protein -
— Both
LINF_320015700 ⚠
chaperonin containing t-complex protein - put
— Both
LINF_230021100 ⚠
T-complex protein 1 - gamma subunit - putativ
— Both
LINF_200018800 ⚠
RNasePH-like protein
— Both
LINF_080016200 ⚠
phosphoribosylpyrophosphate synthetase
— Both
LINF_210018500 ⚠
T-complex protein 1 - delta subunit - putativ
— Both
LINF_080005800 ⚠
adaptor complex protein (AP) 3 delta subunit
— Both
LINF_030006100 ⚠
acetyltransferase - putative
— Both
LINF_030011900 ⚠
DEAD/DEAH box helicase/Type III restriction e
— Both
Page 1 of 2
Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.