LbrM.18.0200

RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative
Leishmania braziliensis MHOM/BR/75/M2904 OG6: OG6_108327 OG7: OG7_0002956 24 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
Applies on "Apply filters".
Reset
⬇ CSV
Network view all shared interactors, plus up to 150 more
Show:
Selection: Shift+drag also box-selects. Drag any selected node to move the whole selection.
Interactions 24 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
LbrM.04.0570 ⚠
palmitoyl acyltransferase 1, putative
— Both
LbrM.34.2571 ⚠
ankyrin repeat protein, putative
— OG7
LbrM.28.1460 ⚠
Ankyrin repeats (3 copies)/DHHC palmitoyltran
— OG7
LbrM.30.3300 ⚠
Ankyrin repeats (3 copies), putative
— OG7
LbrM.33.0150 ⚠
Ankyrin repeats (3 copies), putative
— OG7
LbrM.18.1200 ⚠
Ankyrin repeats (3 copies), putative
— OG7
LbrM.34.1170 ⚠
thioredoxin-like protein
— OG7
LbrM.05.0310 ⚠
monothiol glutaredoxin, putative
— OG7
LbrM.29.1160 ⚠
Ankyrin repeats (3 copies), putative
— OG7
LbrM.17.0420 ⚠
hypothetical protein, conserved
— OG7
LbrM.01.0140 ⚠
monothiol glutaredoxin, putative
— Both
LbrM.09.1300 ⚠
hypothetical protein, conserved
— OG6
LbrM.21.0870 ⚠
ras-related protein Rab21, putative
— OG6
LbrM.22.1160 ⚠
hypothetical protein, unknown function
— Both
LbrM.02.0420 ⚠
ubiquitin-conjugating enzyme E2, putative
— Both
LbrM.26.2030 ⚠
protein kinase, putative
— Both
LbrM.17.0340 ⚠
cytidine deaminase-like protein
— Both
LbrM.30.3470 ⚠
protein mkt1, putative
— OG6
LbrM.31.2910 ⚠
hypothetical protein, unknown function
— Both
LbrM.20.1190 ⚠
Uncharacterised ACR, YggU family COG1872, put
— Both
LbrM.32.3790 ⚠
hypothetical protein, conserved
— Both
LbrM.35.6800 ⚠
hypothetical protein, unknown function
— Both
LbrM.35.1350 ⚠
hypothetical protein, conserved
— Both
LbrM.32.2020 ⚠
rab11B GTPase, putative
— OG6
Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.