LmxM.33.3860

small nuclear ribonucleoprotein sm d3
Leishmania mexicana MHOM/GT/2001/U1103 OG6: OG6_102085 OG7: OG7_0003694 57 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
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Interactions 57 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
LmxM.22.1060 ⚠
SmD-1 like small nuclear ribonucleoprotein, s
— Both
LmxM.08.0080 ⚠
ATP-dependent DEAD/H RNA helicase, putative
— OG7
LmxM.28.2740a ⚠
hypothetical protein
— OG7
LmxM.28.2750partial ⚠
hypothetical protein
— OG7
LmxM.28.2740 ⚠
activated protein kinase c receptor (LACK)
— OG7
LmxM.36.0580 ⚠
hypothetical protein, unknown function
— OG7
LmxM.29.1400 ⚠
WD domain, G-beta repeat, putative
— OG7
LmxM.34.3100 ⚠
ATP-dependent RNA helicase, putative
— OG7
LmxM.28.2080 ⚠
DEAD-box ATP-dependent RNA helicase, mitochon
— OG7
LmxM.07.0340 ⚠
ATP-dependent RNA helicase DBP2B, putative
— OG7
LmxM.36.6350 ⚠
poly(A)-specific ribonuclease PARN, putative
— OG7
LmxM.29.3015 ⚠
Lsm5p, putative
— OG7
LmxM.34.2340 ⚠
ribonuclease, putative
— OG7
LmxM.23.1630 ⚠
hypothetical protein, conserved
— OG7
LmxM.10.0140 ⚠
DEAD/DEAH box helicase, putative, mitochondri
— OG7
LmxM.36.2130 ⚠
ATP-dependent RNA helicase DBP2A, putative
— OG7
LmxM.26.0005 ⚠
Lsm7p protein, putative
— +2 more OG7
LmxM.25.1700 ⚠
Leucine-rich repeat, putative
— OG7
LmxM.34.3310 ⚠
Leucine Rich repeats (2 copies), putative
— OG7
LmxM.36.0710 ⚠
Protein C21orf2 homolog, putative
— OG7
LmxM.31.0170 ⚠
U2 small nuclear ribonucleoprotein 40K, putat
— OG7
LmxM.03.0120 ⚠
hypothetical protein, conserved
— OG7
LmxM.07.0300 ⚠
hypothetical protein, conserved
— OG7
LmxM.01.0640 ⚠
HSP70-like protein
— OG7
LmxM.18.1370 ⚠
heat shock protein, putative
— OG7
LmxM.26.0900 ⚠
chaperone protein-like protein, heat shock 70
— OG7
LmxM.34.4710 ⚠
Hsp70 protein, putative
— OG7
LmxM.36.0180 ⚠
elongation factor 2
— OG7
LmxM.25.2080 ⚠
elongation factor 2-like protein
— OG7
LmxM.01.0560 ⚠
pre-mRNA processing factor 3 (PRP3)/Protein o
— Both
LmxM.21.1120
U4/U6 small nuclear ribonuclear protein, puta
— OG6
LmxM.21.1450 ⚠
methyltransferase-like protein
— Both
LmxM.28.1200 ⚠
luminal binding protein 1 (BiP), putative
— Both
LmxM.28.2820 ⚠
heat shock protein 70, putative
— OG6
LmxM.28.2770 ⚠
heat-shock protein hsp70, putative
— Both
LmxM.26.1240 ⚠
heat shock protein 70-related protein
— Both
LmxM.28.2780 ⚠
heat-shock protein hsp70, putative
— Both
LmxM.31.1070 ⚠
small nuclear ribonucleoprotein, putative
— +3 more Both
LmxM.36.6985 ⚠
RNA-binding protein 14
— Both
LmxM.27.2480 ⚠
hypothetical protein, conserved, WD-repeat pr
— Both
LmxM.27.1970 ⚠
small nuclear ribonucleoprotein protein, puta
— Both
LmxM.23.0290 ⚠
Checkpoint protein HUS1, putative
— Both
LmxM.16.1250 ⚠
hypothetical protein, conserved
— Both
LmxM.01.0160 ⚠
LSM domain containing protein, putative
— +2 more OG7
LmxM.16.1630 ⚠
Putative snoRNA binding domain containing pro
— Both
LmxM.23.0650 ⚠
DIM-like protein, putative, spliceosomal U5 s
— Both
LmxM.29.1205 ⚠
small nuclear ribonucleoprotein polypeptide e
— +3 more Both
LmxM.34.3950 ⚠
PRP8 protein homologue, putative, U5 snRNA-as
— Both
LmxM.34.4460 ⚠
sm-f snRNP core complex protein, putative
— +3 more Both
LmxM.16.1590
u1 small nuclear ribonucleoprotein 70 kDa
— OG6
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Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.