TRSC58_02457

pre-mRNA-processing factor 8
Trypanosoma rangeli SC58 OG6: OG6_101765 OG7: OG7_0006744 68 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
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Interactions 68 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
TRSC58_04833 ⚠
ATP-dependent RNA helicase
— Both
TRSC58_01183 ⚠
RNA helicase
— Both
TRSC58_00998 ⚠
RNA helicase
— OG7
TRSC58_07010 ⚠
RNA helicase
— OG7
TRSC58_05382 ⚠
RNA helicase
— OG7
TRSC58_05988 ⚠
DNA polymerase theta (helicase domain only)
— OG7
TRSC58_00955
proteasome regulatory ATPase subunit
— OG6
TRSC58_06474 ⚠
activated protein kinase C receptor
— OG7
TRSC58_06654
hypothetical protein
— Both
TRSC58_05508
small nuclear ribonucleoprotein SmD2
— Both
TRSC58_05170 ⚠
small nuclear ribonucleoprotein Sm-F
— Both
TRSC58_05743
hypothetical protein
— Both
TRSC58_04093 ⚠
small nuclear ribonucleoprotein component
— Both
TRSC58_02033
spliceosomal U5 snRNP-specific protein
— Both
TRSC58_01471 ⚠
hypothetical protein
— Both
TRSC58_00810 ⚠
hypothetical protein
— Both
TRSC58_04920
40S ribosomal protein S10
— Both
TRSC58_04540
hypothetical protein
— Both
TRSC58_01856
proteasome regulatory non-ATPase subunit 3
— Both
TRSC58_00348
proteasome regulatory non-ATPase subunit 6
— Both
TRSC58_02439 ⚠
hypothetical protein
— Both
TRSC58_01972
hypothetical protein
— Both
TRSC58_01648
hypothetical protein
— Both
TRSC58_02169 ⚠
hypothetical protein
— OG7
TRSC58_02390 ⚠
acetyl-CoA carboxylase
— Both
TRSC58_03778 ⚠
U6 snRNA-associated Sm-like protein LSm6p
— OG7
TRSC58_06578 ⚠
U6 snRNA-associated Sm-like protein LSm7
— OG7
TRSC58_04189 ⚠
small nuclear ribonucleoprotein Sm-E
— OG7
TRSC58_00608 ⚠
hypothetical protein
— OG7
TRSC58_02713 ⚠
small nuclear ribonucleoprotein
— OG7
TRSC58_03088 ⚠
elongation factor 2
— OG7
TRSC58_06347 ⚠
elongation factor 2
— OG7
TRSC58_06854 ⚠
elongation factor 2
— OG7
TRSC58_04517 ⚠
hypothetical protein
— OG7
TRSC58_01553 ⚠
translation elongation factor EF-2
— OG7
TRSC58_05168
proteasome regulatory non-ATPase subunit
— Both
TRSC58_05490
hypothetical protein
— Both
TRSC58_02244
proteasome regulatory ATPase subunit 1
— OG6
TRSC58_00414
hypothetical protein
— Both
TRSC58_06330 ⚠
26S proteasome regulatory subunit N1
— Both
TRSC58_05928
hypothetical protein
— OG6
TRSC58_02424
protein kinase
— OG6
TRSC58_00459
proteasome regulatory ATPase subunit 3
— OG6
TRSC58_03376
proteasome regulatory non-ATPase subunit 5
— Both
TRSC58_02253 ⚠
small nuclear ribonucleoprotein Sm-G
— Both
TRSC58_03435 ⚠
hypothetical protein
— Both
TRSC58_04413
hypothetical protein
— Both
TRSC58_04807
proteasome regulatory non-ATPase subunit 8
— Both
TRSC58_04318 ⚠
26S proteasome regulatory non-ATPase subunit
— Both
TRSC58_07068 ⚠
26S proteasome regulatory subunit N1
— Both
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Orthogroup expansion — connections between the query proteins
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How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.