TRSC58_02713

small nuclear ribonucleoprotein
Trypanosoma rangeli SC58 OG6: OG6_147179 OG7: OG7_0003694 46 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
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Interactions 46 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
TRSC58_06030 ⚠
small nuclear ribonucleoprotein
— OG7
TRSC58_05313 ⚠
hypothetical protein
— OG7
TRSC58_05271 ⚠
hypothetical protein
— OG7
TRSC58_02457 ⚠
pre-mRNA-processing factor 8
— OG7
TRSC58_06996 ⚠
hypothetical protein
— OG7
TRSC58_05470 ⚠
ATP-dependent DEAD/H RNA helicase
— OG7
TRSC58_01432 ⚠
hypothetical protein
— OG7
TRSC58_04711 ⚠
ATP-dependent RNA helicase DDX5/DBP2
— OG7
TRSC58_00703 ⚠
ATP-dependent DEAD/H RNA helicase
— OG7
TRSC58_02748 ⚠
ATP-dependent RNA helicase
— OG7
TRSC58_02146 ⚠
hypothetical protein
— OG7
TRSC58_04980 ⚠
hypothetical protein
— OG7
TRSC58_04540 ⚠
hypothetical protein
— OG7
TRSC58_03474 ⚠
hypothetical protein
— OG7
TRSC58_05831 ⚠
hypothetical protein
— OG7
TRSC58_05107 ⚠
hypothetical protein
— OG7
TRSC58_04951 ⚠
hypothetical protein
— OG7
TRSC58_04899 ⚠
methyltransferase
— OG7
TRSC58_03088 ⚠
elongation factor 2
— OG7
TRSC58_06347 ⚠
elongation factor 2
— OG7
TRSC58_06854 ⚠
elongation factor 2
— OG7
TRSC58_04517 ⚠
hypothetical protein
— OG7
TRSC58_01553 ⚠
translation elongation factor EF-2
— OG7
TRSC58_04093 ⚠
small nuclear ribonucleoprotein component
— OG7
TRSC58_06578 ⚠
U6 snRNA-associated Sm-like protein LSm7
— +2 more OG7
TRSC58_05567 ⚠
U6 snRNA-associated Sm-like protein LSm5p
— Both
TRSC58_00785 ⚠
U2 small nuclear ribonucleoprotein 40k Da
— Both
TRSC58_05496 ⚠
hypothetical protein
— OG7
TRSC58_01195 ⚠
hypothetical protein
— OG7
TRSC58_02169 ⚠
hypothetical protein
— OG7
TRSC58_06474 ⚠
activated protein kinase C receptor
— OG7
TRSC58_05007 ⚠
small nuclear ribonucleoprotein
— OG7
TRSC58_03874 ⚠
U6 snRNA-associated Sm-like protein LSm8p
— +2 more OG7
TRSC58_05170 ⚠
small nuclear ribonucleoprotein Sm-F
— +2 more OG7
TRSC58_03778 ⚠
U6 snRNA-associated Sm-like protein LSm6p
— +2 more OG7
TRSC58_02253 ⚠
small nuclear ribonucleoprotein Sm-G
— +3 more Both
TRSC58_04189 ⚠
small nuclear ribonucleoprotein Sm-E
— +2 more OG7
TRSC58_05508 ⚠
small nuclear ribonucleoprotein SmD2
— OG7
TRSC58_01972 ⚠
hypothetical protein
— OG7
TRSC58_04545 ⚠
ATP-dependent RNA helicase DDX46/PRP5
— OG7
TRSC58_04334 ⚠
ATP-dependent RNA helicase
— OG7
TRSC58_00761 ⚠
hypothetical protein
— OG7
TRSC58_04153 ⚠
ribonuclease
— OG7
TRSC58_00321 ⚠
hypothetical protein
— OG7
TRSC58_05743 ⚠
hypothetical protein
— OG7
TRSC58_02033 ⚠
spliceosomal U5 snRNP-specific protein
— OG7
Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.