TRSC58_05007

small nuclear ribonucleoprotein
Trypanosoma rangeli SC58 OG6: OG6_101868 OG7: OG7_0004920 91 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
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Interactions 91 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
TRSC58_03272 ⚠
elongation factor 1-alpha (EF-1-alpha)
— OG7
TRSC58_02011 ⚠
hypothetical protein
— OG7
TRSC58_04035 ⚠
hypothetical protein
— OG7
TRSC58_05923 ⚠
hypothetical protein
— OG7
TRSC58_03392 ⚠
hypothetical protein
— OG7
TRSC58_05194 ⚠
hypothetical protein
— OG7
TRSC58_03427 ⚠
hypothetical protein
— OG7
TRSC58_06006 ⚠
hypothetical protein
— OG7
TRSC58_01579 ⚠
hypothetical protein
— OG7
TRSC58_04065 ⚠
hypothetical protein
— OG7
TRSC58_01200 ⚠
hypothetical protein
— OG7
TRSC58_05497 ⚠
hypothetical protein
— OG7
TRSC58_02038 ⚠
hypothetical protein
— OG7
TRSC58_01384 ⚠
elongation factor 1-alpha (EF-1-alpha)
— OG7
TRSC58_05580 ⚠
elongation factor 1-alpha
— OG7
TRSC58_00797 ⚠
elongation factor 1-alpha (EF-1-alpha)
— OG7
TRSC58_06737 ⚠
elongation factor 1-alpha (EF-1-alpha)
— OG7
TRSC58_04575 ⚠
elongation factor 1-alpha
— OG7
TRSC58_02114 ⚠
hypothetical protein
— OG7
TRSC58_06766 ⚠
elongation factor 1-alpha (EF-1-alpha)
— OG7
TRSC58_02901 ⚠
elongation factor 1-alpha
— OG7
TRSC58_06578 ⚠
U6 snRNA-associated Sm-like protein LSm7
— OG7
TRSC58_03778 ⚠
U6 snRNA-associated Sm-like protein LSm6p
— OG7
TRSC58_04545 ⚠
ATP-dependent RNA helicase DDX46/PRP5
— OG7
TRSC58_01553 ⚠
translation elongation factor EF-2
— OG7
TRSC58_04517 ⚠
hypothetical protein
— OG7
TRSC58_06854 ⚠
elongation factor 2
— OG7
TRSC58_06347 ⚠
elongation factor 2
— OG7
TRSC58_03088 ⚠
elongation factor 2
— OG7
TRSC58_02748 ⚠
ATP-dependent RNA helicase
— OG7
TRSC58_00703 ⚠
ATP-dependent DEAD/H RNA helicase
— OG7
TRSC58_04711 ⚠
ATP-dependent RNA helicase DDX5/DBP2
— OG7
TRSC58_01432 ⚠
hypothetical protein
— OG7
TRSC58_05470 ⚠
ATP-dependent DEAD/H RNA helicase
— OG7
TRSC58_00761 ⚠
hypothetical protein
— OG7
TRSC58_02713 ⚠
small nuclear ribonucleoprotein
— OG7
TRSC58_02014 ⚠
FKBP-type peptidyl-prolyl cis-trans isomerase
— OG7
TRSC58_05165 ⚠
peptidyl-prolyl cis-trans isomerase
— OG7
TRSC58_05256 ⚠
peptidylprolyl isomerase
— OG7
TRSC58_00788 ⚠
peptidyl-prolyl cis-trans isomerase
— OG7
TRSC58_02976 ⚠
macrophage infectivity potentiator, precursor
— OG7
TRSC58_06824 ⚠
FKBP-type peptidyl-prolyl cis-trans isomerase
— OG7
TRSC58_05705 ⚠
tryptophanyl-tRNA synthetase
— OG7
TRSC58_01273 ⚠
regulator of chromosome condensation (RCC1)
— OG7
TRSC58_05537 ⚠
chromatin binding protein
— OG7
TRSC58_00325 ⚠
hypothetical protein
— OG7
TRSC58_00321
hypothetical protein
— Both
TRSC58_02457
pre-mRNA-processing factor 8
— Both
TRSC58_05508
small nuclear ribonucleoprotein SmD2
— Both
TRSC58_05271
hypothetical protein
— Both
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Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.