TRSC58_02033

spliceosomal U5 snRNP-specific protein
Trypanosoma rangeli SC58 OG6: OG6_102797 OG7: OG7_0006110 26 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
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Network view all shared interactors, plus up to 150 more
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Selection: Shift+drag also box-selects. Drag any selected node to move the whole selection.
Interactions 26 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
TRSC58_05508
small nuclear ribonucleoprotein SmD2
— Both
TRSC58_01553 ⚠
translation elongation factor EF-2
— OG7
TRSC58_04517 ⚠
hypothetical protein
— OG7
TRSC58_06854 ⚠
elongation factor 2
— OG7
TRSC58_06347 ⚠
elongation factor 2
— OG7
TRSC58_03088 ⚠
elongation factor 2
— OG7
TRSC58_02713 ⚠
small nuclear ribonucleoprotein
— OG7
TRSC58_04189 ⚠
small nuclear ribonucleoprotein Sm-E
— OG7
TRSC58_06578 ⚠
U6 snRNA-associated Sm-like protein LSm7
— OG7
TRSC58_03778 ⚠
U6 snRNA-associated Sm-like protein LSm6p
— OG7
TRSC58_06474 ⚠
activated protein kinase C receptor
— OG7
TRSC58_02169 ⚠
hypothetical protein
— OG7
TRSC58_01972
hypothetical protein
— Both
TRSC58_05496
hypothetical protein
— Both
TRSC58_04093 ⚠
small nuclear ribonucleoprotein component
— Both
TRSC58_02457
pre-mRNA-processing factor 8
— Both
TRSC58_04540
hypothetical protein
— Both
TRSC58_05170 ⚠
small nuclear ribonucleoprotein Sm-F
— Both
TRSC58_05743
hypothetical protein
— Both
TRSC58_00321
hypothetical protein
— Both
TRSC58_03874 ⚠
U6 snRNA-associated Sm-like protein LSm8p
— Both
TRSC58_06226 ⚠
small nuclear ribonucleoprotein SmD3
— Both
TRSC58_05007
small nuclear ribonucleoprotein
— Both
TRSC58_02253 ⚠
small nuclear ribonucleoprotein Sm-G
— Both
TRSC58_06030
small nuclear ribonucleoprotein
— Both
TRSC58_01195 ⚠
hypothetical protein
— Both
Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.