TcIL3000.11.14770

RNA polymerase subunit, putative
Trypanosoma congolense IL3000 OG6: OG6_102167 OG7: OG7_0003800 20 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
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Network view all shared interactors, plus up to 150 more
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Interactions 20 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
TcIL3000_0_33050 ⚠
RNA polymerase IIA largest subunit, putative
— Both
TcIL3000.11.620 ⚠
RNA polymerase I second largest subunit (frag
— OG7
TcIL3000_10_13150 ⚠
DNA-directed RNA polymerases I and III subuni
— OG7
TcIL3000.11.610 ⚠
RNA polymerase I second largest subunit (frag
— OG7
TcIL3000_8_4870 ⚠
DNA-directed rna polymerase I largest subunit
— OG7
TcIL3000_10_11410 ⚠
DNA-directed RNA polymerase I subunit RPB5z,
— OG7
TcIL3000_10_11420 ⚠
DNA-directed RNA polymerases II subunit, puta
— Both
TcIL3000_4_3350 ⚠
DNA-directed RNA polymerase II subunit 2, put
— Both
TcIL3000.11.80 ⚠
DNA-directed RNA polymerase subunit, putative
— Both
TcIL3000_3_3210 ⚠
hypothetical protein, conserved
— Both
TcIL3000_0_24140 ⚠
DNA-directed RNA polymerase II subunit 3, put
— Both
TcIL3000_1_120 ⚠
DNA-directed RNA polymerase III, putative
— Both
TcIL3000_8_6450 ⚠
Succinate dehydrogenase [ubiquinone] flavopro
— Both
TcIL3000_10_2390 ⚠
DNA-directed RNA polymerase III subunit C1, p
— Both
TcIL3000_3_3450 ⚠
DNA-directed RNA polymerase II subunit 3, put
— Both
TcIL3000_4_4270 ⚠
RNA polymerase IIA largest subunit, putative
— Both
TcIL3000_0_29100 ⚠
DNA-directed RNA polymerase II subunit 2, put
— Both
TcIL3000_0_32940 ⚠
DNA-directed RNA polymerase II subunit 2, put
— Both
TcIL3000_0_51360 ⚠
RNA polymerase beta subunit/RNA polymerase Rp
— Both
TcIL3000_8_6820 ⚠
hypothetical protein, conserved
— Both
Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.