TcIL3000_3_3450

DNA-directed RNA polymerase II subunit 3, putative
Trypanosoma congolense IL3000 OG6: OG6_101363 OG7: OG7_0003550 108 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
Applies on "Apply filters".
Reset
⬇ CSV
Network view all shared interactors, plus up to 150 more
Show:
Selection: Shift+drag also box-selects. Drag any selected node to move the whole selection.
Interactions 108 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
TcIL3000_0_51360 ⚠
RNA polymerase beta subunit/RNA polymerase Rp
— Both
TcIL3000_0_32940 ⚠
DNA-directed RNA polymerase II subunit 2, put
— Both
TcIL3000_0_29100 ⚠
DNA-directed RNA polymerase II subunit 2, put
— Both
TcIL3000_4_4270 ⚠
RNA polymerase IIA largest subunit, putative
— +1 more Both
TcIL3000_10_2390 ⚠
DNA-directed RNA polymerase III subunit C1, p
— +1 more Both
TcIL3000_1_120 ⚠
DNA-directed RNA polymerase III, putative
— Both
TcIL3000_0_33050 ⚠
RNA polymerase IIA largest subunit, putative
— +1 more Both
TcIL3000_4_3350 ⚠
DNA-directed RNA polymerase II subunit 2, put
— Both
TcIL3000_8_4870 ⚠
DNA-directed rna polymerase I largest subunit
— OG7
TcIL3000.11.610 ⚠
RNA polymerase I second largest subunit (frag
— OG7
TcIL3000_4_1510 ⚠
hypothetical protein, conserved
— Both
TcIL3000.11.620 ⚠
RNA polymerase I second largest subunit (frag
— OG7
TcIL3000_10_11410 ⚠
DNA-directed RNA polymerase I subunit RPB5z,
— OG7
TcIL3000_10_5850 ⚠
Gamma-tubulin complex component 3-like protei
— OG7
TcIL3000.11.7410 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_7_1320 ⚠
zinc finger protein, putative
— OG7
TcIL3000_2_1430 ⚠
adenylate kinase, putative
— OG7
TcIL3000_10_11620 ⚠
Zn-finger in Ran binding protein and others/F
— OG7
TcIL3000_10_680 ⚠
adenylate kinase, putative
— OG7
TcIL3000_10_7240 ⚠
Concanavalin A-like lectin/glucanases superfa
— OG7
TcIL3000_8_5130 ⚠
WW domain containing protein, putative
— OG7
TcIL3000_7_3050 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_10_9940 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_10_9170 ⚠
protein kinase, putative
— OG7
TcIL3000_9_5860 ⚠
hypothetical protein, conserved (fragment)
— OG7
TcIL3000_4_820 ⚠
hypothetical protein
— OG7
TcIL3000_0_25450 ⚠
SPRY domain containing protein, putative (fra
— OG7
TcIL3000_8_3570 ⚠
AKAP7 2'5' RNA ligase-like domain containing
— OG7
TcIL3000_9_2920 ⚠
adenylate kinase, putative
— OG7
TcIL3000_8_1450 ⚠
ubiquitin-protein ligase, putative
— OG7
TcIL3000_6_2060 ⚠
hypothetical protein, conserved (fragment)
— OG7
TcIL3000_8_2740 ⚠
hypothetical protein, conserved (fragment)
— OG7
TcIL3000_10_7870 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_10_13390 ⚠
zinc finger protein, putative
— OG7
TcIL3000_6_1870 ⚠
ubiquitin-protein ligase, putative
— OG7
TcIL3000_10_8800 ⚠
structural maintenance of chromosome 2, putat
— OG7
TcIL3000_10_2630 ⚠
ABC transporter, putative
— OG7
TcIL3000_10_9180 ⚠
ATP-binding cassette sub-family F member 1, p
— OG7
TcIL3000_10_13320 ⚠
ABC transporter, putative
— OG7
TcIL3000_7_2140 ⚠
histone H2A, putative
— OG7
TcIL3000_7_5270 ⚠
histone H2A variant Z
— OG7
TcIL3000_10_11380 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_10_11370 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_10_600 ⚠
structural maintenance of chromosome 4, putat
— OG7
TcIL3000_0_18230 ⚠
structural maintenance of chromosome 3 , puta
— OG7
TcIL3000_0_46740 ⚠
RecF/RecN/SMC N terminal domain containing pr
— OG7
TcIL3000_9_4840 ⚠
structural maintenance of chromosome 1, putat
— OG7
TcIL3000_0_19850 ⚠
acetyl-CoA carboxylase
— OG7
TcIL3000_1_1300 ⚠
histone H3, putative
— OG7
TcIL3000_4_260 ⚠
GRIP domain containing protein, putative
— OG7
Page 1 of 3
Next →
Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.