TcIL3000_10_600

structural maintenance of chromosome 4, putative
Trypanosoma congolense IL3000 OG6: OG6_101113 OG7: OG7_0001761 254 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
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Interactions 254 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
TcIL3000_2_1430 ⚠
adenylate kinase, putative
— OG7
TcIL3000_0_36120 ⚠
neurobeachin/beige protein, putative
— OG7
TcIL3000_8_4870 ⚠
DNA-directed rna polymerase I largest subunit
— OG7
TcIL3000_0_46040 ⚠
hypothetical protein, conserved
— OG7
TcIL3000.11.9050 ⚠
Cell division control protein 48, putative
— OG7
TcIL3000_0_21910 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_4_820 ⚠
hypothetical protein
— OG7
TcIL3000_9_5860 ⚠
hypothetical protein, conserved (fragment)
— OG7
TcIL3000_0_44990 ⚠
Right handed beta helix region containing pro
— OG7
TcIL3000_7_4310 ⚠
SpoU rRNA Methylase family, putative
— OG7
TcIL3000_0_23340 ⚠
hypothetical protein, conserved (fragment)
— OG7
TcIL3000_10_9170 ⚠
protein kinase, putative
— OG7
TcIL3000_10_9940 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_10_6450 ⚠
cullin, putative
— OG7
TcIL3000_4_3460 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_0_02340 ⚠
DIGIT
— OG7
TcIL3000_1_120 ⚠
DNA-directed RNA polymerase III, putative
— OG7
TcIL3000_0_33050 ⚠
RNA polymerase IIA largest subunit, putative
— OG7
TcIL3000_7_3050 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_0_30120 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_0_21150 ⚠
hypothetical protein
— OG7
TcIL3000_0_33740 ⚠
dynein light chain p28, axonemal, putative
— OG7
TcIL3000_0_42730 ⚠
Beige/BEACH domain containing protein, putati
— OG7
TcIL3000_10_2390 ⚠
DNA-directed RNA polymerase III subunit C1, p
— OG7
TcIL3000_0_07950 ⚠
hypothetical protein
— OG7
TcIL3000.11.14330 ⚠
Pab1p-dependent poly(A) ribonuclease subunit,
— OG7
TcIL3000_4_2780 ⚠
Nucleoporin NUP225
— OG7
TcIL3000_10_680 ⚠
adenylate kinase, putative
— OG7
TcIL3000_4_150 ⚠
snoRNP protein GAR1, putative (fragment)
— OG7
TcIL3000_3_3450 ⚠
DNA-directed RNA polymerase II subunit 3, put
— OG7
TcIL3000.11.16020 ⚠
ubiquitin carboxyl-terminal hydrolase, putati
— OG7
TcIL3000_10_11620 ⚠
Zn-finger in Ran binding protein and others/F
— OG7
TcIL3000_0_51360 ⚠
RNA polymerase beta subunit/RNA polymerase Rp
— OG7
TcIL3000_10_930 ⚠
chrX additional, unordered contigs
— OG7
TcIL3000_0_22010 ⚠
cullin 1, putative
— OG7
TcIL3000_0_17200 ⚠
ZFP family member, putative (fragment)
— OG7
TcIL3000_0_23810 ⚠
adenylate kinase, putative
— OG7
TcIL3000_4_260 ⚠
GRIP domain containing protein, putative
— OG7
TcIL3000.11.15970 ⚠
zinc finger protein, putative
— OG7
TcIL3000_0_47810 ⚠
ubiquitin carboxyl-terminal hydrolase, putati
— OG7
TcIL3000.11.5800 ⚠
dynein arm light chain, axonemal, putative
— OG7
TcIL3000_8_5720 ⚠
cullin, putative
— OG7
TcIL3000_8_5040 ⚠
cullin, putative
— OG7
TcIL3000_9_5850 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_0_15340 ⚠
protein kinase A regulatory subunit
— OG7
TcIL3000_5_4510 ⚠
adenylate kinase, putative
— OG7
TcIL3000_0_08010 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_7_220 ⚠
FYVE zinc finger, putative
— OG7
TcIL3000_4_4270 ⚠
RNA polymerase IIA largest subunit, putative
— OG7
TcIL3000_10_5200 ⚠
neurobeachin/beige protein, putative
— OG7
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Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.