TcIL3000_2_1350

WD-repeat protein, putative, pre-mRNA splicing factor 19, putative
Trypanosoma congolense IL3000 OG6: OG6_102145 OG7: OG7_0007160 105 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
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Interactions 105 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
TcIL3000_10_8240
predicted WD40 repeat protein
— Both
TcIL3000_0_17500 ⚠
zinc finger CCCH domain containing protein 11
— OG7
TcIL3000_6_120
ccr4-not transcription complex subunit
— Both
TcIL3000_10_1750
U1 small nuclear ribonucleoprotein C, putativ
— Both
TcIL3000_1_1600 ⚠
TPR repeat, putative
— Both
TcIL3000_7_4730
hypothetical protein, conserved (fragment)
— Both
TcIL3000_0_17140 ⚠
2-oxoglutarate dehydrogenase E1 component, pu
— Both
TcIL3000.11.10480 ⚠
2-oxoglutarate dehydrogenase E1 component, pu
— Both
TcIL3000.11.1340 ⚠
2-oxoglutarate dehydrogenase subunit, putativ
— Both
TcIL3000.11.13720
AAA ATPase, putative
— Both
TcIL3000_3_1800 ⚠
hypothetical protein, conserved
— Both
TcIL3000_0_54520
hypothetical protein, conserved (fragment)
— OG7
TcIL3000_7_5570 ⚠
Phosphatidylinositol 4-phosphate 5-kinase, pu
— OG7
TcIL3000_4_1950 ⚠
Sec7 domain containing protein, putative
— OG7
TcIL3000_0_38710 ⚠
ubiquitin-protein ligase, putative
— OG7
TcIL3000_8_5130 ⚠
WW domain containing protein, putative
— OG7
TcIL3000_6_1870 ⚠
ubiquitin-protein ligase, putative
— OG7
TcIL3000_0_55120 ⚠
hypothetical protein
— OG7
TcIL3000_0_11960 ⚠
HECT-domain (ubiquitin-transferase), putative
— OG7
TcIL3000_0_25450 ⚠
SPRY domain containing protein, putative (fra
— OG7
TcIL3000_6_2060 ⚠
hypothetical protein, conserved (fragment)
— OG7
TcIL3000_10_8790 ⚠
Anaphase-promoting complex, cyclosome, subuni
— OG7
TcIL3000_10_11410 ⚠
DNA-directed RNA polymerase I subunit RPB5z,
— OG7
TcIL3000_0_33690
Kinetochore interacting protein 5
— OG7
TcIL3000_5_1490 ⚠
zinc finger CCCH domain containing protein 12
— OG7
TcIL3000_3_50 ⚠
zinc finger protein 2, putative
— OG7
TcIL3000_5_1510 ⚠
zinc finger CCCH domain containing protein 13
— OG7
TcIL3000_9_1040 ⚠
U6 snRNA-associated Sm-like protein LSm6p, Sm
— OG7
TcIL3000_0_18230 ⚠
structural maintenance of chromosome 3 , puta
— OG7
TcIL3000_0_46740 ⚠
RecF/RecN/SMC N terminal domain containing pr
— OG7
TcIL3000_9_4840 ⚠
structural maintenance of chromosome 1, putat
— OG7
TcIL3000_10_8800 ⚠
structural maintenance of chromosome 2, putat
— OG7
TcIL3000_0_00320 ⚠
structural maintenance of chromosome 3 , puta
— OG7
TcIL3000.11.14960 ⚠
phosphatidylinositol 3-related kinase, putati
— OG7
TcIL3000_10_7280 ⚠
Phosphatidylinositol 3-kinase tor1
— OG7
TcIL3000_4_110 ⚠
Phosphatidylinositol 3-kinase tor2
— OG7
TcIL3000_2_150 ⚠
phosphatidylinositol kinase related protein,
— OG7
TcIL3000_2_140 ⚠
phosphatidylinositol kinase related protein,
— OG7
TcIL3000_4_380 ⚠
TOR-like 1 (fragment)
— OG7
TcIL3000.11.14950 ⚠
Phosphatidylinositol 3- and 4-kinase/FATC dom
— OG7
TcIL3000_0_01730 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_10_13560
hypothetical protein, conserved
— Both
TcIL3000_0_49340 ⚠
zinc finger CCCH domain containing protein 13
— OG7
TcIL3000_0_23340 ⚠
hypothetical protein, conserved (fragment)
— OG7
TcIL3000_0_25090 ⚠
zinc finger CCCH domain containing protein 12
— OG7
TcIL3000_0_37550 ⚠
zinc finger CCCH domain containing protein 11
— OG7
TcIL3000_0_34800 ⚠
Flagellum attachment zone protein 11
— OG7
TcIL3000_10_4140 ⚠
small nuclear ribonucleoprotein, putative
— OG7
TcIL3000_5_4560 ⚠
U6 snRNA-associated Sm-like protein LSm7p, pu
— OG7
TcIL3000_3_880 ⚠
U6 snRNA-associated Sm-like protein LSm8p
— OG7
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Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.