TcIL3000_5_4560

U6 snRNA-associated Sm-like protein LSm7p, putative
Trypanosoma congolense IL3000 OG6: OG6_102418 OG7: OG7_0001217 141 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
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Interactions 141 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
TcIL3000_8_1290 ⚠
hypothetical protein
— OG7
TcIL3000_5_4040 ⚠
ATP-dependent DEAD/H RNA helicase, putative
— OG7
TcIL3000_10_5710 ⚠
ATP-dependent RNA helicase DBP2A, putative
— OG7
TcIL3000_10_12440 ⚠
ATP-dependent RNA helicase HEL67
— OG7
TcIL3000_8_3710 ⚠
mitochondrial, ATP-dependent DEAD/H RNA helic
— OG7
TcIL3000_0_04480 ⚠
ATP-dependent DEAD/H RNA helicase, putative
— OG7
TcIL3000_3_880 ⚠
U6 snRNA-associated Sm-like protein LSm8p
— +2 more OG7
TcIL3000_8_1270 ⚠
ATP-dependent RNA helicase DBP2B, putative
— OG7
TcIL3000_9_1040 ⚠
U6 snRNA-associated Sm-like protein LSm6p, Sm
— +2 more OG7
TcIL3000_0_56050 ⚠
ATP-dependent DEAD/H RNA helicase, putative
— OG7
TcIL3000.11.9180 ⚠
DEAD-box ATP-dependent RNA helicase, mitochon
— OG7
TcIL3000_8_1450 ⚠
ubiquitin-protein ligase, putative
— OG7
TcIL3000_0_25410 ⚠
ATPase family associated with various cellula
— OG7
TcIL3000_10_6860 ⚠
replication factor C subunit 3, putative
— OG7
TcIL3000_0_50610 ⚠
Replication Factor C Subunit 1-related protei
— OG7
TcIL3000_6_3350 ⚠
replication factor C, subunit 2, putative
— OG7
TcIL3000_9_5080 ⚠
replication factor C, subunit 3, putative (fr
— OG7
TcIL3000_7_2230 ⚠
Galactose oxidase, central domain/Kelch motif
— OG7
TcIL3000_5_4430 ⚠
Galactose oxidase, central domain/Domain of u
— OG7
TcIL3000.11.9770 ⚠
Galactose oxidase, central domain containing
— OG7
TcIL3000_10_4920 ⚠
Galactose oxidase, central domain containing
— OG7
TcIL3000_0_22030 ⚠
Galactose oxidase, central domain containing
— OG7
TcIL3000_1_320 ⚠
kelch domain-containing protein
— OG7
TcIL3000_10_7430 ⚠
Galactose oxidase, central domain containing
— OG7
TcIL3000_8_5980 ⚠
Galactose oxidase, central domain/Kelch motif
— OG7
TcIL3000.11.3970 ⚠
BTB/POZ domain/Galactose oxidase, central dom
— OG7
TcIL3000.11.380 ⚠
conserved protein
— OG7
TcIL3000_9_1520 ⚠
ubiquitin-activating enzyme E1, putative
— OG7
TcIL3000_10_7230 ⚠
Concanavalin A-like lectin/glucanases superfa
— OG7
TcIL3000_9_5450 ⚠
IQ calmodulin-binding motif containing protei
— OG7
TcIL3000_10_710 ⚠
hook complex protein, conserved (fragment)
— OG7
TcIL3000_10_7240 ⚠
Concanavalin A-like lectin/glucanases superfa
— OG7
TcIL3000_8_5130 ⚠
WW domain containing protein, putative
— OG7
TcIL3000_10_8600 ⚠
ubiquitin-protein ligase, putative
— OG7
TcIL3000_0_34520 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_0_25450 ⚠
SPRY domain containing protein, putative (fra
— OG7
TcIL3000_9_3760 ⚠
hypothetical protein
— OG7
TcIL3000_3_2620 ⚠
RNA binding protein, putative
— OG7
TcIL3000.11.12860 ⚠
ATP-dependent protease ATPase subunit HslU2
— OG7
TcIL3000_0_05260 ⚠
heat shock protein HslVU, ATPase subunit HslU
— OG7
TcIL3000_0_16260 ⚠
hypothetical protein, conserved (fragment)
— OG7
TcIL3000_0_52670 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_5_4080 ⚠
hypothetical protein, conserved
— OG7
TcIL3000.11.3980 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_10_1750 ⚠
U1 small nuclear ribonucleoprotein C, putativ
— OG7
TcIL3000_0_37770 ⚠
RNA binding protein, putative
— OG7
TcIL3000_3_1810 ⚠
eukaryotic translation initiation factor 2 su
— OG7
TcIL3000_0_11480 ⚠
Dyggve-Melchior-Clausen syndrome protein, put
— OG7
TcIL3000.11.3320 ⚠
hypothetical protein, conserved
— OG7
TcIL3000.11.3370 ⚠
hypothetical protein, conserved
— OG7
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Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.