LINF_360010700

U2 small nuclear ribonucleoprotein 16.5K - putativeGeneDB:LmjF.36.0535
Leishmania infantum JPCM5 OG6: OG6_147179 OG7: OG7_0003694 46 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
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Interactions 46 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
LINF_220016600 ⚠
small nuclear ribonucleoprotein - putative
— OG7
LINF_030006000 ⚠
Leucine Rich Repeat - putative
— OG7
LINF_230008200 ⚠
Checkpoint protein HUS1
— OG7
LINF_350028700 ⚠
poly(A)-specific ribonuclease PARN - putative
— OG7
LINF_010010700 ⚠
pre-mRNA processing factor 3 (PRP3)/Protein o
— OG7
LINF_070008800 ⚠
ATP-dependent DEAD/H RNA helicase - putative
— OG7
LINF_080005700 ⚠
ATP-dependent DEAD/H RNA helicase - putative
— OG7
LINF_100006300 ⚠
DEAD/DEAH box helicase - putative
— OG7
LINF_280027400 ⚠
DEAD-box ATP-dependent RNA helicase - mitocho
— OG7
LINF_270033000 ⚠
WD-repeat protein
— OG7
LINF_210008600 ⚠
U1 small nuclear ribonucleoprotein C - putati
— OG7
LINF_360082100 ⚠
U1A small nuclear ribonucleoprotein - putativ
— OG7
LINF_160018300 ⚠
hypothetical protein - conserved
— OG7
LINF_350038500 ⚠
hypothetical protein - conserved
— OG7
LINF_070008200 ⚠
hypothetical protein - conserved
— OG7
LINF_250023600 ⚠
Leucine-rich repeat/Leucine Rich repeats (2 c
— OG7
LINF_360012700 ⚠
Protein C21orf2 homolog - putative
— OG7
LINF_210023100 ⚠
arginine N-methyltransferase - type II - puta
— OG7
LINF_360007100 ⚠
elongation factor 2
— OG7
LINF_360006900 ⚠
elongation factor 2
— OG7
LINF_360006800 ⚠
elongation factor 2
— OG7
LINF_250027700 ⚠
elongation factor 2-like protein
— OG7
LINF_360007000 ⚠
elongation factor 2
— OG7
LINF_320028300 ⚠
U5 small nuclear ribonucleoprotein component
— OG7
LINF_350050400 ⚠
sm-f snRNP core complex protein - putative
— +2 more OG7
LINF_320016400 ⚠
small nuclear ribonucleoprotein - putative
— +3 more Both
LINF_320006800 ⚠
U2 small nuclear ribonucleoprotein 40K - puta
— Both
LINF_280034800 ⚠
receptor for activated C kinase 1
— OG7
LINF_280037800 ⚠
U5 snRNP-specific 40 kDa protein - putative
— OG7
LINF_300019600 ⚠
WD domain - G-beta repeat - putative
— OG7
LINF_280034700 ⚠
receptor for activated C kinase 1
— OG7
LINF_360011300 ⚠
WD domain - G-beta repeat - putative
— OG7
LINF_270026800 ⚠
small nuclear ribonucleoprotein protein - put
— OG7
LINF_250023700 ⚠
LSM domain containing protein - putative
— +2 more OG7
LINF_010006500 ⚠
LSM domain containing protein - putative
— +2 more OG7
LINF_300035600 ⚠
Lsm5p - putative
— Both
LINF_300017700 ⚠
small nuclear ribonucleoprotein polypeptide e
— +2 more OG7
LINF_260005000 ⚠
Lsm7p protein - putative
— +2 more OG7
LINF_330042000 ⚠
small nuclear ribonucleoprotein SmD2
— OG7
LINF_320031700 ⚠
hypothetical protein - conserved
— OG7
LINF_350036300 ⚠
ATP-dependent RNA helicase - putative
— OG7
LINF_360028400 ⚠
DEAD box RNA helicase - putative
— OG7
LINF_320009100 ⚠
ATP-dependent RNA helicase - putative
— OG7
LINF_360074400 ⚠
poly(A)-specific ribonuclease PARN - putative
— OG7
LINF_230014200 ⚠
spliceosomal U5 snRNP-specific protein - puta
— OG7
LINF_230011500 ⚠
poly(A)-specific ribonuclease PARN - putative
— OG7
Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.