LINF_260005000

Lsm7p protein - putative
Leishmania infantum JPCM5 OG6: OG6_102418 OG7: OG7_0001217 132 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
Applies on "Apply filters".
Reset
⬇ CSV
Network view all shared interactors, plus up to 150 more
Show:
Selection: Shift+drag also box-selects. Drag any selected node to move the whole selection.
Interactions 132 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
LINF_300017700 ⚠
small nuclear ribonucleoprotein polypeptide e
— +2 more OG7
LINF_350050400 ⚠
sm-f snRNP core complex protein - putative
— +2 more OG7
LINF_320016400 ⚠
small nuclear ribonucleoprotein - putative
— +2 more OG7
LINF_010006500 ⚠
LSM domain containing protein - putative
— +2 more OG7
LINF_250023700 ⚠
LSM domain containing protein - putative
— +2 more OG7
LINF_280027400 ⚠
DEAD-box ATP-dependent RNA helicase - mitocho
— OG7
LINF_070008800 ⚠
ATP-dependent DEAD/H RNA helicase - putative
— OG7
LINF_320009100 ⚠
ATP-dependent RNA helicase - putative
— OG7
LINF_360028400 ⚠
DEAD box RNA helicase - putative
— OG7
LINF_350036300 ⚠
ATP-dependent RNA helicase - putative
— OG7
LINF_100006300 ⚠
DEAD/DEAH box helicase - putative
— OG7
LINF_080005700 ⚠
ATP-dependent DEAD/H RNA helicase - putative
— OG7
LINF_360053000 ⚠
ubiquitin protein ligase - putative
— OG7
LINF_320027600 ⚠
hypothetical protein - conserved
— OG7
LINF_070012900 ⚠
HEAT-like repeat - putative
— OG7
LINF_270033830 ⚠
hypothetical protein
— OG7
LINF_020012400 ⚠
Heat shock protein 100 kDa
— OG7
LINF_290018600 ⚠
Heat shock protein 100 kDa
— OG7
LINF_330032400 ⚠
succinyl-coA:3-ketoacid-coenzyme A transferas
— OG7
LINF_300024100 ⚠
succinyl-coa:3-ketoacid-coenzyme a transferas
— OG7
LINF_300024000 ⚠
succinyl-coa:3-ketoacid-coenzyme a transferas
— OG7
LINF_170011700 ⚠
ATPase family associated with various cellula
— OG7
LINF_300031400 ⚠
replication factor C - subunit 2 - putative
— OG7
LINF_350037900 ⚠
replication factor C - subunit 3 - putative
— OG7
LINF_270011500 ⚠
replication factor C - subunit 4 - putative
— OG7
LINF_360078900 ⚠
ATPase - putative
— OG7
LINF_200016000 ⚠
hypothetical protein - conserved
— OG7
LINF_250009300 ⚠
Translation initiation factor SUI1 - putative
— OG7
LINF_240027100 ⚠
Kelch motif/Galactose oxidase - central domai
— OG7
LINF_240009600 ⚠
Kelch motif/Galactose oxidase - central domai
— OG7
LINF_220016300 ⚠
Galactose oxidase - central domain/Kelch moti
— OG7
LINF_360071700 ⚠
Galactose oxidase - central domain containing
— OG7
LINF_280022200 ⚠
Kelch motif/Galactose oxidase - central domai
— OG7
LINF_200007100 ⚠
kelch domain-containing protein
— OG7
LINF_360020900 ⚠
Kelch motif/Galactose oxidase - central domai
— OG7
LINF_160005800 ⚠
Galactose oxidase - central domain/Kelch moti
— OG7
LINF_010012200 ⚠
ubiquitin activating enzyme - putative
— OG7
LINF_350029800 ⚠
ubiquitin-protein ligase - putative
— OG7
LINF_140015200 ⚠
glutathione synthetase - putative
— OG7
LINF_130013700 ⚠
hypothetical protein - conserved
— OG7
LINF_210008600 ⚠
U1 small nuclear ribonucleoprotein C - putati
— OG7
LINF_050007500 ⚠
Ankyrin repeat - putative
— OG7
LINF_360082100 ⚠
U1A small nuclear ribonucleoprotein - putativ
— OG7
LINF_280018000 ⚠
hypothetical protein - conserved
— OG7
LINF_290020400 ⚠
LYAR-type C2HC zinc finger containing protein
— OG7
LINF_130019200 ⚠
hypothetical protein - conserved
— OG7
LINF_010008900 ⚠
Dyggve-Melchior-Clausen syndrome protein - pu
— OG7
LINF_230008200 ⚠
Checkpoint protein HUS1
— OG7
LINF_030014900 ⚠
eukaryotic initiation factor 2a - putative
— OG7
LINF_130019800 ⚠
hypothetical protein - conserved
— OG7
Page 1 of 3
Next →
Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.