TcIL3000.11.9490

Replication factor A protein 1
Trypanosoma congolense IL3000 OG6: OG6_101316 OG7: OG7_0004216 102 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
Applies on "Apply filters".
Reset
⬇ CSV
Network view all shared interactors, plus up to 150 more
Show:
Selection: Shift+drag also box-selects. Drag any selected node to move the whole selection.
Interactions 102 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
TcIL3000_6_3140 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_0_02490 ⚠
hypothetical protein, conserved
— Both
TcIL3000_4_1580 ⚠
Methyltransferase domain/Methyltransferase in
— Both
TcIL3000_2_370 ⚠
serine peptidase, putative, ATP-dependent Clp
— Both
TcIL3000_8_3320 ⚠
Beta-lactamase superfamily domain containing
— Both
TcIL3000_3_1610
TatD related DNase, putative
— Both
TcIL3000_10_8960
iron-containing hydrogenase, putative
— Both
TcIL3000_0_22460
oxidoreductase, putative (fragment)
— OG7
TcIL3000.11.14090 ⚠
U5 small nuclear ribonucleoprotein component,
— OG7
TcIL3000_10_3760 ⚠
elongation factor 2, putative
— OG7
TcIL3000_0_02840
hypothetical protein, conserved
— OG7
TcIL3000_10_11810 ⚠
tubulin tyrosine ligase protein, putative
— OG7
TcIL3000_0_10970 ⚠
Tubulin-tyrosine ligase family, putative (fra
— OG7
TcIL3000.11.7370 ⚠
tubulin-tyrsoine ligase-like protein, putativ
— OG7
TcIL3000_0_41520 ⚠
tubulin tyrosine ligase, putative (fragment)
— OG7
TcIL3000_3_3320 ⚠
Tubulin-tyrosine ligase family, putative
— OG7
TcIL3000_9_3430 ⚠
tubulin tyrosine ligase protein, putative
— OG7
TcIL3000_0_21510 ⚠
tubulin-tyrsoine ligase-like protein, putativ
— OG7
TcIL3000_5_4350 ⚠
tubulin tyrosine ligase, putative
— OG7
TcIL3000_2_1360 ⚠
tubulin-tyrosine ligase, putative
— OG7
TcIL3000_9_3230 ⚠
GTP-binding protein, putative
— OG7
TcIL3000_7_270 ⚠
GTP-binding protein, putative
— OG7
TcIL3000.11.2390 ⚠
GTP-binding protein, putative
— OG7
TcIL3000_7_6070 ⚠
GTP-binding protein, putative
— OG7
TcIL3000_0_19090 ⚠
hypothetical protein
— OG7
TcIL3000_0_14160 ⚠
dihydrouridine synthase (Dus), putative (frag
— OG7
TcIL3000_0_55150 ⚠
ubiquitin-protein ligase, putative (fragment)
— OG7
TcIL3000_0_19760 ⚠
Ankyrin repeats (3 copies)/Zinc finger, C3HC4
— OG7
TcIL3000_8_4400 ⚠
Zinc finger, C3HC4 type (RING finger), putati
— OG7
TcIL3000_8_3530 ⚠
Zinc finger, C3HC4 type (RING finger) contain
— OG7
TcIL3000_0_20330 ⚠
Plus-3 domain/Zinc finger, C3HC4 type (RING f
— OG7
TcIL3000_0_24910 ⚠
Plus-3 domain/Zinc finger, C3HC4 type (RING f
— OG7
TcIL3000_0_15840 ⚠
Programmed cell death protein 2, C-terminal p
— OG7
TcIL3000_0_40370 ⚠
Programmed cell death protein 2, C-terminal p
— OG7
TcIL3000_0_33580
WD40 repeats, putative (fragment)
— OG7
TcIL3000_5_4320 ⚠
XRN 5'-3' exonuclease N-terminus, putative (f
— OG7
TcIL3000_5_4340 ⚠
XRN 5'-3' exonuclease N-terminus, putative
— OG7
TcIL3000_0_31970 ⚠
ubiquitin carboxyl-terminal hydrolase, putati
— OG7
TcIL3000_4_2920 ⚠
tRNA-dihydrouridine synthase 4, putative
— OG7
TcIL3000_10_8600 ⚠
ubiquitin-protein ligase, putative
— OG7
TcIL3000_0_42020 ⚠
zinc carboxypeptidase, putative
— OG7
TcIL3000_10_4060 ⚠
tRNA-dihydrouridine synthase 2, putative
— OG7
TcIL3000.11.14630 ⚠
Zinc finger, ZZ type, putative
— OG7
TcIL3000_7_5760 ⚠
mitochondrial glycoprotein-like protein, puta
— OG7
TcIL3000_7_5350 ⚠
tRNA-dihydrouridine synthase 3, putative
— OG7
TcIL3000_0_04870 ⚠
ubiquitin carboxyl-terminal hydrolase, putati
— OG7
TcIL3000_10_9050 ⚠
metallo-peptidase, Clan MC, Family M14, putat
— OG7
TcIL3000.11.10800 ⚠
metallo-peptidase, Clan MC, Family M14, putat
— OG7
TcIL3000_8_7000 ⚠
metallo-peptidase, Clan ME, Family M16, putat
— Both
TcIL3000_0_26670 ⚠
p22 protein precursor, putative
— OG7
Page 1 of 3
Next →
Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.