TcIL3000_4_2920

tRNA-dihydrouridine synthase 4, putative
Trypanosoma congolense IL3000 OG6: OG6_104072 OG7: OG7_0002064 219 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
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Interactions 219 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
TcIL3000_0_54580 ⚠
DNA ligase I, putative (fragment)
— OG7
TcIL3000_6_4250 ⚠
DNA ligase I, putative (fragment)
— OG7
TcIL3000_10_13840 ⚠
glucosidase, putative
— OG7
TcIL3000_10_11080 ⚠
Multisite-specific tRNA:(cytosine-C(5))-methy
— OG7
TcIL3000_9_5280 ⚠
pentatricopeptide repeat domain containing pr
— OG7
TcIL3000_2_400 ⚠
kinetoplast polyadenylation/uridylation facto
— OG7
TcIL3000_7_1410 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_0_33680 ⚠
hypothetical protein (fragment)
— OG7
TcIL3000_0_48490 ⚠
Cupin-like domain containing protein, putativ
— OG7
TcIL3000_0_43380 ⚠
UDP-glucose:glycoprotein glucosyltransferase,
— OG7
TcIL3000_3_2820 ⚠
UDP-glucose:glycoprotein glucosyltransferase,
— OG7
TcIL3000_3_2810 ⚠
Glycosyl transferase family 8, putative
— OG7
TcIL3000_9_3760 ⚠
hypothetical protein
— OG7
TcIL3000_9_3750 ⚠
SET domain containing protein, putative (frag
— OG7
TcIL3000_6_2060 ⚠
hypothetical protein, conserved (fragment)
— OG7
TcIL3000_8_1450 ⚠
ubiquitin-protein ligase, putative
— OG7
TcIL3000_0_25450 ⚠
SPRY domain containing protein, putative (fra
— OG7
TcIL3000.11.6180 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_0_42120 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_8_1790 ⚠
pitrilysin-like metalloprotease, putative, me
— OG7
TcIL3000_0_11960 ⚠
HECT-domain (ubiquitin-transferase), putative
— OG7
TcIL3000_0_55120 ⚠
hypothetical protein
— OG7
TcIL3000_6_1870 ⚠
ubiquitin-protein ligase, putative
— OG7
TcIL3000_8_5130 ⚠
WW domain containing protein, putative
— OG7
TcIL3000_10_7240 ⚠
Concanavalin A-like lectin/glucanases superfa
— OG7
TcIL3000_0_38710 ⚠
ubiquitin-protein ligase, putative
— OG7
TcIL3000_10_7230 ⚠
Concanavalin A-like lectin/glucanases superfa
— OG7
TcIL3000_9_1930 ⚠
general transcription factor IIB
— OG7
TcIL3000_8_7150 ⚠
Component of IIS longevity pathway SMK-1, put
— OG7
TcIL3000_6_3520 ⚠
GTPase activating protein, putative
— OG7
TcIL3000_10_7530 ⚠
GTPase activating protein, putative
— OG7
TcIL3000.11.3550 ⚠
Thiamin pyrophosphokinase, vitamin B1 binding
— OG7
TcIL3000_6_2120 ⚠
importin alpha subunit, putative
— OG7
TcIL3000_10_11560 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_6_1480 ⚠
aspartyl-tRNA synthetase, putative
— OG7
TcIL3000_4_2130 ⚠
asparaginyl-tRNA synthetase, putative
— OG7
TcIL3000_10_1050 ⚠
OB-fold nucleic acid binding domain/tRNA synt
— OG7
TcIL3000_5_4340 ⚠
XRN 5'-3' exonuclease N-terminus, putative
— OG7
TcIL3000_5_4320 ⚠
XRN 5'-3' exonuclease N-terminus, putative (f
— OG7
TcIL3000_3_1610 ⚠
TatD related DNase, putative
— OG7
TcIL3000_10_7960 ⚠
isoleucyl-tRNA synthetase, putative (fragment
— OG7
TcIL3000_0_07170 ⚠
protein kinase, putative
— OG7
TcIL3000_7_1550 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_10_5740 ⚠
hypothetical protein, conserved, member of th
— OG7
TcIL3000.11.7660 ⚠
acidocalcisomal pyrophosphatase
— OG7
TcIL3000_0_38820 ⚠
acidocalcisomal pyrophosphatase
— OG7
TcIL3000_3_1740 ⚠
inorganic pyrophosphatase, putative
— OG7
TcIL3000_6_1720 ⚠
histidyl-tRNA synthetase
— OG7
TcIL3000_0_33580 ⚠
WD40 repeats, putative (fragment)
— OG7
TcIL3000_5_2840 ⚠
Rab-GTPase-TBC domain containing protein, put
— OG7
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Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.