TcIL3000_7_5350

tRNA-dihydrouridine synthase 3, putative
Trypanosoma congolense IL3000 OG6: OG6_101202 OG7: OG7_0002064 227 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
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Interactions 227 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
TcIL3000_6_4250 ⚠
DNA ligase I, putative (fragment)
— Both
TcIL3000_0_54580 ⚠
DNA ligase I, putative (fragment)
— Both
TcIL3000_0_02840 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_7_5060 ⚠
protein kinase, putative
— OG7
TcIL3000_0_32980 ⚠
protein kinase, putative
— OG7
TcIL3000_0_10490 ⚠
serine/threonine protein kinase, putative
— OG7
TcIL3000_10_13090 ⚠
protein kinase, putative
— OG7
TcIL3000_10_13100 ⚠
hypothetical protein
— OG7
TcIL3000_0_29040 ⚠
protein kinase, putative (fragment)
— OG7
TcIL3000_0_56880 ⚠
protein kinase, putative
— OG7
TcIL3000_2_1340 ⚠
protein kinase, putative
— OG7
TcIL3000_7_6070 ⚠
GTP-binding protein, putative
— OG7
TcIL3000.11.2390 ⚠
GTP-binding protein, putative
— OG7
TcIL3000_7_270 ⚠
GTP-binding protein, putative
— OG7
TcIL3000_9_3230 ⚠
GTP-binding protein, putative
— OG7
TcIL3000_5_4930 ⚠
GTP-binding protein, putative
— OG7
TcIL3000_2_1360 ⚠
tubulin-tyrosine ligase, putative
— OG7
TcIL3000_5_4350 ⚠
tubulin tyrosine ligase, putative
— OG7
TcIL3000_0_21510 ⚠
tubulin-tyrsoine ligase-like protein, putativ
— OG7
TcIL3000_9_3430 ⚠
tubulin tyrosine ligase protein, putative
— OG7
TcIL3000_3_3320 ⚠
Tubulin-tyrosine ligase family, putative
— OG7
TcIL3000_0_41520 ⚠
tubulin tyrosine ligase, putative (fragment)
— OG7
TcIL3000.11.7370 ⚠
tubulin-tyrsoine ligase-like protein, putativ
— OG7
TcIL3000_0_10970 ⚠
Tubulin-tyrosine ligase family, putative (fra
— OG7
TcIL3000_10_2630 ⚠
ABC transporter, putative
— OG7
TcIL3000_10_9180 ⚠
ATP-binding cassette sub-family F member 1, p
— OG7
TcIL3000_6_3840 ⚠
homoserine kinase
— OG7
TcIL3000_10_11810 ⚠
tubulin tyrosine ligase protein, putative
— OG7
TcIL3000_1_900 ⚠
tubulin-tyrosine ligase, putative
— OG7
TcIL3000_5_4290 ⚠
aspartate carbamoyltransferase, putative
— OG7
TcIL3000_4_1580 ⚠
Methyltransferase domain/Methyltransferase in
— OG7
TcIL3000_8_7090 ⚠
peptidase, putative
— OG7
TcIL3000_0_43580 ⚠
Peptidase family M20/M25/M40, putative (fragm
— OG7
TcIL3000_9_5070 ⚠
Peroxin 19
— OG7
TcIL3000_8_2250 ⚠
Fungal tRNA ligase phosphodiesterase domain c
— OG7
TcIL3000_6_3140 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_0_42020 ⚠
zinc carboxypeptidase, putative
— OG7
TcIL3000.11.14630 ⚠
Zinc finger, ZZ type, putative
— OG7
TcIL3000_4_1500 ⚠
Carboxypeptidase-like protein
— OG7
TcIL3000_10_10490 ⚠
cytosolic nonspecific dipeptidase, putative
— OG7
TcIL3000_10_8600 ⚠
ubiquitin-protein ligase, putative
— OG7
TcIL3000_10_9850 ⚠
Protein prenyltransferase alpha subunit repea
— OG7
TcIL3000_0_04870 ⚠
ubiquitin carboxyl-terminal hydrolase, putati
— OG7
TcIL3000_8_7000 ⚠
metallo-peptidase, Clan ME, Family M16, putat
— OG7
TcIL3000.11.10800 ⚠
metallo-peptidase, Clan MC, Family M14, putat
— OG7
TcIL3000_3_1280 ⚠
translation elongation factor EF-2, putative
— OG7
TcIL3000.11.14090 ⚠
U5 small nuclear ribonucleoprotein component,
— OG7
TcIL3000_8_2480 ⚠
ubiquitin-activating enzyme E1, putative
— OG7
TcIL3000_0_55160 ⚠
ubiquitin-activating enzyme E1, putative
— OG7
TcIL3000_0_25380 ⚠
tyrosyl-DNA Phosphodiesterase (Tdp1), putativ
— OG7
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Orthogroup expansion — connections between the query proteins
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How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.