TcIL3000_0_04510

RNA-binding protein
Trypanosoma congolense IL3000 OG6: OG6_147257 OG7: OG7_0000011 30 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
Applies on "Apply filters".
Reset
⬇ CSV
Network view all shared interactors, plus up to 150 more
Show:
Selection: Shift+drag also box-selects. Drag any selected node to move the whole selection.
Interactions 30 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
TcIL3000_10_8020
adenylyl cyclase-associated protein, putative
— OG6
TcIL3000.11.14030 ⚠
ornithine decarboxylase, putative
— OG6
TcIL3000_0_32090 ⚠
ornithine decarboxylase
— OG6
TcIL3000.11.380
conserved protein
— OG6
TcIL3000_0_05260 ⚠
heat shock protein HslVU, ATPase subunit HslU
— OG6
TcIL3000_5_1430 ⚠
ATP-dependent protease ATPase subunit HslU1,
— OG6
TcIL3000_10_340
NIMA-related protein kinase
— OG6
TcIL3000.11.10810
hypothetical protein, conserved
— OG6
TcIL3000.11.2280 ⚠
metallo-peptidase, Clan MF, Family M17 (fragm
— OG6
TcIL3000_4_2760
EAP30/Vps36 family, putative
— OG6
TcIL3000_3_3520 ⚠
tryptophanyl-tRNA synthetase, putative
— OG6
TcIL3000_0_30560 ⚠
tryptophanyl-tRNA synthetase
— OG6
TcIL3000_2_890
small nuclear ribonucleoprotein SmD1, putativ
— OG6
TcIL3000_0_42660
leucine-rich repeat-containing protein
— OG6
TcIL3000_9_5840
helicase, putative
— OG6
TcIL3000_0_08000
tRNA synthetases class II (A)/Threonyl and Al
— OG6
TcIL3000_0_24310 ⚠
hypothetical protein (fragment)
— OG6
TcIL3000_0_15160 ⚠
ribonucleoside-diphosphate reductase small ch
— OG6
TcIL3000_0_35830 ⚠
ribonucleoside-diphosphate reductase small ch
— OG6
TcIL3000_0_54850
paraflagellar rod component, putative
— OG6
TcIL3000.11.6690 ⚠
eukaryotic release factor 3, putative
— OG6
TcIL3000_0_08320 ⚠
eukaryotic release factor 3, putative
— OG6
TcIL3000_7_1700
hypothetical protein, conserved
— OG6
TcIL3000_7_3530
Protein of unknown function (DUF1253), putati
— OG6
TcIL3000_0_07900 ⚠
E1-like ubiquitin-activating enzyme, putative
— OG6
TcIL3000_9_2040 ⚠
E1-like ubiquitin-activating enzyme, putative
— OG6
TcIL3000.11.12860
ATP-dependent protease ATPase subunit HslU2
— OG6
TcIL3000.11.7170 ⚠
hypothetical protein (fragment)
— OG6
TcIL3000_0_35010 ⚠
metallo-peptidase, Clan MF, Family M17
— OG6
TcIL3000.11.6820
pyruvate phosphate dikinase
— OG6
Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.