TcYC6_0076330

small nuclear ribonucleoprotein protein, putative
Trypanosoma cruzi Y C6 OG6: OG6_101868 OG7: OG7_0004920 83 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
Applies on "Apply filters".
Reset
⬇ CSV
Network view all shared interactors, plus up to 150 more
Show:
Selection: Shift+drag also box-selects. Drag any selected node to move the whole selection.
Interactions 83 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
TcYC6_0085400 ⚠
U6 snRNA-associated Sm-like protein LSm6p
— OG7
TcYC6_0056280 ⚠
putative regulator of chromosome condensation
— OG7
TcYC6_0047800 ⚠
hypothetical protein, conserved
— OG7
TcYC6_0104160 ⚠
Regulator of chromosome condensation (RCC1) r
— OG7
TcYC6_0071260 ⚠
regulator of chromosome condensation (RCC1),
— OG7
TcYC6_0044010 ⚠
regulator of chromatin condensation, putative
— OG7
TcYC6_0127450 ⚠
hypothetical protein, conserved
— OG7
TcYC6_0088960 ⚠
Regulator of chromosome condensation (RCC1) r
— OG7
TcYC6_0089210 ⚠
hypothetical protein
— OG7
TcYC6_0096470 ⚠
WD domain, G-beta repeat, putative
— OG7
TcYC6_0011610 ⚠
receptor for activated C kinase 1
— OG7
TcYC6_0175230 ⚠
regulator of chromosome condensation 1-like p
— OG7
TcYC6_0053880 ⚠
U6 snRNA-associated Sm-like protein LSm4
— OG7
TcYC6_0080190 ⚠
U2 small nuclear ribonucleoprotein 16.5K, put
— OG7
TcYC6_0021560 ⚠
U6 snRNA-associated Sm-like protein LSm7p
— OG7
TcYC6_0075310 ⚠
hypothetical protein
— Both
TcYC6_0114670 ⚠
ATP-dependent RNA helicase HEL67
— Both
TcYC6_0051120
U5 snRNP-associated 102 kDa protein, putative
— Both
TcYC6_0051670 ⚠
small nuclear ribonucleoprotein component
— Both
TcYC6_0117610
hypothetical protein, conserved
— OG6
TcYC6_0088430
EAP30/Vps36 family, putative
— Both
TcYC6_0014480 ⚠
DEAD-box ATP-dependent RNA helicase, mitochon
— OG7
TcYC6_0080660 ⚠
elongation factor 2
— OG7
TcYC6_0080610 ⚠
elongation factor 2
— OG7
TcYC6_0080670 ⚠
elongation factor 2
— OG7
TcYC6_0080640 ⚠
elongation factor 2
— OG7
TcYC6_0080620 ⚠
elongation factor 2
— OG7
TcYC6_0119810 ⚠
translation elongation factor EF-2, putative
— OG7
TcYC6_0080630 ⚠
elongation factor 2
— OG7
TcYC6_0080650 ⚠
elongation factor 2
— OG7
TcYC6_0069180 ⚠
ATP-dependent RNA helicase, putative
— OG7
TcYC6_0099660 ⚠
ATP-dependent DEAD/H RNA helicase, putative
— OG7
TcYC6_0107920
tryptophanyl-tRNA synthetase, putative
— OG6
TcYC6_0062920 ⚠
ATP-dependent DEAD/H RNA helicase, putative
— OG7
TcYC6_0066250 ⚠
ATP-dependent DEAD/H RNA helicase
— OG7
TcYC6_0126490 ⚠
ATP-dependent RNA helicase DBP2A, putative
— OG7
TcYC6_0080560 ⚠
peptidyl-prolyl cis-trans isomerase, putative
— OG7
TcYC6_0113550 ⚠
FKBP-type peptidylprolyl cis-trans isomerase,
— OG7
TcYC6_0113560 ⚠
macrophage infectivity potentiator, precursor
— OG7
TcYC6_0113000 ⚠
FK506-binding protein (FKBP)-type peptidyl-pr
— OG7
TcYC6_0093940 ⚠
peptidyl-prolyl cis-trans isomerase, putative
— OG7
TcYC6_0057750 ⚠
hypothetical protein, conserved
— OG7
TcYC6_0121110
RNA-binding protein 14
— Both
TcYC6_0032370 ⚠
Checkpoint protein HUS1, putative
— Both
TcYC6_0096210 ⚠
small nuclear ribonucleoprotein Sm-E, putativ
— +1 more Both
TcYC6_0091140 ⚠
small nuclear ribonucleoprotein sm d3
— Both
TcYC6_0070170
U5 snRNA-associated splicing factor, putative
— Both
TcYC6_0075710
pre-mRNA splicing factor 19, putative
— Both
TcYC6_0009420
U1 small nuclear ribonucleoprotein C, putativ
— Both
TcYC6_0043150
eukaryotic release factor 3, putative
— OG6
Page 1 of 2
Next →
Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.