TcIL3000.11.120

cleavage and polyadenylation specificity factor, putative (fragment)
Trypanosoma congolense IL3000 OG6: OG6_103283 OG7: OG7_0002417 159 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
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Interactions 159 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
TcIL3000_4_840 ⚠
cleavage and polyadenylation specificity fact
— Both
TcIL3000.11.110 ⚠
cleavage and polyadenylation specificity fact
— OG7
TcIL3000_6_1770 ⚠
NUDC-like protein, putative, nuclear movement
— OG7
TcIL3000_6_250 ⚠
alanyl-tRNA synthetase, putative
— Both
TcIL3000_10_13320 ⚠
ABC transporter, putative
— Both
TcIL3000_7_3480 ⚠
N-terminal conserved domain of Nudc./CS domai
— Both
TcIL3000_10_11310 ⚠
cyclophilin type peptidyl-prolyl cis-trans is
— OG6
TcIL3000_10_13840 ⚠
glucosidase, putative
— Both
TcIL3000_0_39490 ⚠
hypothetical protein, conserved (fragment)
— OG6
TcIL3000_1_1150 ⚠
Pre-mRNA-splicing factor 38, putative
— Both
TcIL3000_7_5350 ⚠
tRNA-dihydrouridine synthase 3, putative
— Both
TcIL3000_10_3710 ⚠
PUB domain containing protein, putative
— Both
TcIL3000_3_1340 ⚠
eukaryotic translation initiation factor 3 su
— Both
TcIL3000_10_1300 ⚠
methionyl-tRNA synthetase, putative
— Both
TcIL3000_1_1470 ⚠
tRNA (Uracil-5-)-methyltransferase, putative
— Both
TcIL3000_0_30560 ⚠
tryptophanyl-tRNA synthetase
— Both
TcIL3000_3_1530 ⚠
hypothetical protein, conserved
— Both
TcIL3000_0_07170 ⚠
protein kinase, putative
— Both
TcIL3000_9_3750 ⚠
SET domain containing protein, putative (frag
— Both
TcIL3000_3_3520 ⚠
tryptophanyl-tRNA synthetase, putative
— Both
TcIL3000_9_3760 ⚠
hypothetical protein
— Both
TcIL3000.11.890 ⚠
Nuclear pore complex protein 158 (fragment),
— Both
TcIL3000_10_6100 ⚠
myo-inositol-1-phosphate synthase, putative
— Both
TcIL3000_1_1600 ⚠
TPR repeat, putative
— Both
TcIL3000_0_33410 ⚠
hypothetical protein (fragment)
— OG6
TcIL3000_7_5720 ⚠
hypothetical protein, conserved
— Both
TcIL3000_10_7960 ⚠
isoleucyl-tRNA synthetase, putative (fragment
— Both
TcIL3000.11.5890 ⚠
hypothetical protein, conserved
— Both
TcIL3000.11.8840 ⚠
DIS3-like exonuclease, putative
— Both
TcIL3000_2_390 ⚠
Gar1/Naf1 RNA binding region, putative
— Both
TcIL3000_3_1740 ⚠
inorganic pyrophosphatase, putative
— Both
TcIL3000_0_38820 ⚠
acidocalcisomal pyrophosphatase
— Both
TcIL3000.11.7660 ⚠
acidocalcisomal pyrophosphatase
— Both
TcIL3000.11.13720 ⚠
AAA ATPase, putative
— Both
TcIL3000_9_2450 ⚠
exoribonuclease DSS-1 (EMBL:AY233297), putati
— OG7
TcIL3000.11.8070 ⚠
exosome complex exonuclease RRP44p homologue
— OG7
TcIL3000_10_9180 ⚠
ATP-binding cassette sub-family F member 1, p
— OG7
TcIL3000_0_23020 ⚠
tRNA-dihydrouridine synthase 1, putative
— OG7
TcIL3000_0_14160 ⚠
dihydrouridine synthase (Dus), putative (frag
— OG7
TcIL3000_8_7820 ⚠
dihydrouridine synthase (Dus), putative
— OG7
TcIL3000_10_4060 ⚠
tRNA-dihydrouridine synthase 2, putative
— OG7
TcIL3000_0_00750 ⚠
hypothetical protein, conserved (fragment)
— OG7
TcIL3000_0_34800 ⚠
Flagellum attachment zone protein 11
— OG7
TcIL3000_1_1240 ⚠
Raptor N-terminal CASPase like domain contain
— OG7
TcIL3000_0_02340 ⚠
DIGIT
— OG7
TcIL3000_8_6940 ⚠
Flagellum attachment zone protein 14
— OG7
TcIL3000_7_5840 ⚠
Ankyrin repeats (3 copies), putative
— OG7
TcIL3000_10_1050 ⚠
OB-fold nucleic acid binding domain/tRNA synt
— OG7
TcIL3000_3_3060 ⚠
Ankyrin repeats (many copies)/Ankyrin repeats
— OG7
TcIL3000_0_33680 ⚠
hypothetical protein (fragment)
— OG7
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Orthogroup expansion — connections between the query proteins
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How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.