TcIL3000.11.6000

replication factor C, subunit 1, putative
Trypanosoma congolense IL3000 OG6: OG6_101059 OG7: OG7_0001167 141 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
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Interactions 141 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
TcIL3000_10_1050 ⚠
OB-fold nucleic acid binding domain/tRNA synt
— OG7
TcIL3000.11.12410 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_0_06570 ⚠
MORN repeat-containing protein
— OG7
TcIL3000_0_15660 ⚠
hypothetical protein, conserved (fragment)
— OG7
TcIL3000_9_5450 ⚠
IQ calmodulin-binding motif containing protei
— OG7
TcIL3000_10_710 ⚠
hook complex protein, conserved (fragment)
— OG7
TcIL3000_10_7930 ⚠
Cyclin 12, L-type
— OG7
TcIL3000_0_48810 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_0_03820 ⚠
Eukaryotic translation initiation factor 4E-2
— OG7
TcIL3000_9_4970 ⚠
hypothetical protein, conserved (fragment)
— OG7
TcIL3000_9_5970 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_10_7240 ⚠
Concanavalin A-like lectin/glucanases superfa
— OG7
TcIL3000_6_3400 ⚠
Docking domain of Afi1 for Arf3 in vesicle tr
— OG7
TcIL3000_9_1740 ⚠
mismatch repair protein MSH3, putative
— OG7
TcIL3000_10_8600 ⚠
ubiquitin-protein ligase, putative
— OG7
TcIL3000_0_52960 ⚠
Docking domain of Afi1 for Arf3 in vesicle tr
— OG7
TcIL3000_0_52920 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_0_34520 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_3_880 ⚠
U6 snRNA-associated Sm-like protein LSm8p
— OG7
TcIL3000_0_25450 ⚠
SPRY domain containing protein, putative (fra
— OG7
TcIL3000_0_07850 ⚠
Eukaryotic translation initiation factor 4E-1
— OG7
TcIL3000_9_5080 ⚠
replication factor C, subunit 3, putative (fr
— OG7
TcIL3000_9_4960 ⚠
Putative death-receptor fusion protein (DUF24
— OG7
TcIL3000_0_38490 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_0_50620 ⚠
MORN repeat-containing protein
— OG7
TcIL3000_0_57120 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_0_48480 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_8_1450 ⚠
ubiquitin-protein ligase, putative
— OG7
TcIL3000_6_2060 ⚠
hypothetical protein, conserved (fragment)
— OG7
TcIL3000_10_7810 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_0_24250 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_0_02680 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_4_310 ⚠
geranylgeranyl transferase type II beta subun
— OG7
TcIL3000_0_29030 ⚠
geranylgeranyl transferase type II beta subun
— OG7
TcIL3000_0_32630 ⚠
hypothetical protein
— OG7
TcIL3000_9_1040 ⚠
U6 snRNA-associated Sm-like protein LSm6p, Sm
— OG7
TcIL3000_8_360 ⚠
Domain of unknown function (DUF3437), putativ
— OG7
TcIL3000_3_3580 ⚠
nuclear transcription factor, putative
— OG7
TcIL3000_0_53680 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_0_12430 ⚠
hypothetical protein, conserved
— OG7
TcIL3000.11.13980 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_10_6600 ⚠
protein transport protein Sec23A, putative
— OG7
TcIL3000_9_1280 ⚠
Ring finger domain/Zn-finger in ubiquitin-hyd
— OG7
TcIL3000_0_19500 ⚠
Ring finger domain/Zn-finger in ubiquitin-hyd
— OG7
TcIL3000_4_950 ⚠
Zn-finger in ubiquitin-hydrolases and other p
— OG7
TcIL3000_10_13140 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_0_25700 ⚠
inhibitor of serine peptidase (ISP), putative
— OG7
TcIL3000_5_1680 ⚠
Ecotin-like protein
— OG7
TcIL3000_0_08210 ⚠
ecotin, putative
— OG7
TcIL3000_10_13130 ⚠
hypothetical protein (fragment)
— OG7
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Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.