TcIL3000_3_550

cullin 4B, putative
Trypanosoma congolense IL3000 OG6: OG6_168578 OG7: OG7_0001577 175 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
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Interactions 175 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
TcIL3000.11.14900 ⚠
ATP-dependent DNA DEAD/DEAH box helicase, put
— OG7
TcIL3000_8_3410 ⚠
DNA polymerase theta (helicase domain only),
— OG7
TcIL3000.11.14890 ⚠
ATP-dependent DNA DEAD/DEAH box helicase, put
— OG7
TcIL3000_5_2080 ⚠
ATP-dependent RNA helicase, putative (fragmen
— Both
TcIL3000.11.4440 ⚠
ATP-dependent RNA helicase, putative
— Both
TcIL3000_5_2070 ⚠
ATP-dependent RNA helicase, putative (fragmen
— Both
TcIL3000.11.15970 ⚠
zinc finger protein, putative
— OG7
TcIL3000_0_21140 ⚠
Right handed beta helix region containing pro
— Both
TcIL3000.11.8410 ⚠
DNA replication licensing factor MCM2, putati
— OG6
TcIL3000.11.11300 ⚠
Adaptor protein complex AP-3 subunit beta-3
— Both
TcIL3000_4_4300 ⚠
dihydrolipoamide dehydrogenase, putative
— Both
TcIL3000_9_5660 ⚠
hypothetical protein
— Both
TcIL3000_0_24690 ⚠
Rab3 GTPase-activating protein catalytic subu
— Both
TcIL3000.11.11340 ⚠
glycosyl hydrolase, putative
— Both
TcIL3000_10_11370 ⚠
hypothetical protein, conserved
— Both
TcIL3000_10_11380 ⚠
hypothetical protein, conserved
— Both
TcIL3000_4_1910 ⚠
hypothetical protein, conserved
— OG6
TcIL3000_7_3400 ⚠
WD domain, G-beta repeat/Dip2/Utp12 Family, p
— Both
TcIL3000_8_5970 ⚠
hypothetical protein, conserved
— Both
TcIL3000_5_1110 ⚠
exosome component CSL4, putative
— Both
TcIL3000_5_3590 ⚠
ribose-phosphate pyrophosphokinase, putative
— Both
TcIL3000_0_60440 ⚠
ribose-phosphate pyrophosphokinase, putative
— Both
TcIL3000_0_41520 ⚠
tubulin tyrosine ligase, putative (fragment)
— Both
TcIL3000_5_4350 ⚠
tubulin tyrosine ligase, putative
— Both
TcIL3000_0_42730 ⚠
Beige/BEACH domain containing protein, putati
— Both
TcIL3000_0_01620 ⚠
Concanavalin A-like lectin/glucanases superfa
— Both
TcIL3000.11.9430 ⚠
Nucleolar protein 136, putative
— OG7
TcIL3000_0_51360 ⚠
RNA polymerase beta subunit/RNA polymerase Rp
— OG7
TcIL3000_0_32940 ⚠
DNA-directed RNA polymerase II subunit 2, put
— OG7
TcIL3000_0_29100 ⚠
DNA-directed RNA polymerase II subunit 2, put
— OG7
TcIL3000_1_120 ⚠
DNA-directed RNA polymerase III, putative
— OG7
TcIL3000_4_3350 ⚠
DNA-directed RNA polymerase II subunit 2, put
— OG7
TcIL3000.11.2790 ⚠
phosphoribosylpyrophosphate synthetase, putat
— OG7
TcIL3000_5_3230 ⚠
phosphoribosylpyrophosphate synthetase, putat
— OG7
TcIL3000_10_8190 ⚠
phosphoribosylpyrophosphate synthetase, putat
— OG7
TcIL3000_0_08010 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_1_900 ⚠
tubulin-tyrosine ligase, putative
— OG7
TcIL3000_10_11810 ⚠
tubulin tyrosine ligase protein, putative
— OG7
TcIL3000_0_10970 ⚠
Tubulin-tyrosine ligase family, putative (fra
— OG7
TcIL3000.11.7370 ⚠
tubulin-tyrsoine ligase-like protein, putativ
— OG7
TcIL3000_3_3320 ⚠
Tubulin-tyrosine ligase family, putative
— OG7
TcIL3000_9_3430 ⚠
tubulin tyrosine ligase protein, putative
— OG7
TcIL3000_0_21510 ⚠
tubulin-tyrsoine ligase-like protein, putativ
— OG7
TcIL3000_2_1360 ⚠
tubulin-tyrosine ligase, putative
— OG7
TcIL3000_0_03330 ⚠
hypothetical protein, conserved
— OG7
TcIL3000.11.14950 ⚠
Phosphatidylinositol 3- and 4-kinase/FATC dom
— OG7
TcIL3000_0_03450 ⚠
dihydrolipoamide dehydrogenase, point mutatio
— OG7
TcIL3000_9_4850 ⚠
zinc finger protein, putative (fragment)
— OG7
TcIL3000_10_5210 ⚠
neurobeachin/beige protein, putative (fragmen
— OG7
TcIL3000_0_33050 ⚠
RNA polymerase IIA largest subunit, putative
— OG7
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Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.