TcIL3000_9_5670

ubiquitin-protein ligase, putative (fragment)
Trypanosoma congolense IL3000 OG6: OG6_146796 OG7: OG7_0002947 154 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
Applies on "Apply filters".
Reset
⬇ CSV
Network view all shared interactors, plus up to 150 more
Show:
Selection: Shift+drag also box-selects. Drag any selected node to move the whole selection.
Interactions 154 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
TcIL3000_0_27090 ⚠
PUB domain containing protein, putative (frag
— OG7
TcIL3000_9_5080 ⚠
replication factor C, subunit 3, putative (fr
— OG7
TcIL3000_0_19090 ⚠
hypothetical protein
— OG7
TcIL3000_6_3140 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_10_7230 ⚠
Concanavalin A-like lectin/glucanases superfa
— OG7
TcIL3000_0_38710 ⚠
ubiquitin-protein ligase, putative
— OG7
TcIL3000_10_7240 ⚠
Concanavalin A-like lectin/glucanases superfa
— OG7
TcIL3000_8_5130 ⚠
WW domain containing protein, putative
— OG7
TcIL3000_6_1870 ⚠
ubiquitin-protein ligase, putative
— OG7
TcIL3000_0_55120 ⚠
hypothetical protein
— OG7
TcIL3000_0_11960 ⚠
HECT-domain (ubiquitin-transferase), putative
— OG7
TcIL3000_0_25450 ⚠
SPRY domain containing protein, putative (fra
— OG7
TcIL3000_8_1450 ⚠
ubiquitin-protein ligase, putative
— OG7
TcIL3000_6_2060 ⚠
hypothetical protein, conserved (fragment)
— OG7
TcIL3000_0_31300 ⚠
co-chaperone GrpE, putative
— OG7
TcIL3000_10_10910 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_0_48480 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_0_42020 ⚠
zinc carboxypeptidase, putative
— OG7
TcIL3000_10_9050 ⚠
metallo-peptidase, Clan MC, Family M14, putat
— OG7
TcIL3000.11.10800 ⚠
metallo-peptidase, Clan MC, Family M14, putat
— OG7
TcIL3000_9_3230 ⚠
GTP-binding protein, putative
— OG7
TcIL3000_7_270 ⚠
GTP-binding protein, putative
— OG7
TcIL3000.11.2390 ⚠
GTP-binding protein, putative
— OG7
TcIL3000_7_6070 ⚠
GTP-binding protein, putative
— OG7
TcIL3000_9_1040 ⚠
U6 snRNA-associated Sm-like protein LSm6p, Sm
— OG7
TcIL3000_5_3890 ⚠
ubiquitin-activating enzyme E1, putative
— OG7
TcIL3000_3_880 ⚠
U6 snRNA-associated Sm-like protein LSm8p
— OG7
TcIL3000_9_1520 ⚠
ubiquitin-activating enzyme E1, putative
— OG7
TcIL3000_5_4560 ⚠
U6 snRNA-associated Sm-like protein LSm7p, pu
— OG7
TcIL3000_0_31970 ⚠
ubiquitin carboxyl-terminal hydrolase, putati
— OG7
TcIL3000_0_04870 ⚠
ubiquitin carboxyl-terminal hydrolase, putati
— OG7
TcIL3000_5_4340 ⚠
XRN 5'-3' exonuclease N-terminus, putative
— OG7
TcIL3000_5_4320 ⚠
XRN 5'-3' exonuclease N-terminus, putative (f
— OG7
TcIL3000_9_1990 ⚠
glutamate dehydrogenase
— OG7
TcIL3000_10_1100 ⚠
hypothetical protein (fragment)
— OG7
TcIL3000_10_1090 ⚠
Domain of unknown function (DUF4042), putativ
— OG7
TcIL3000_0_30260 ⚠
guide RNA associated protein, GAP2
— OG7
TcIL3000_7_5890 ⚠
RNA binding protein, putative
— OG7
TcIL3000_10_11570 ⚠
PA26 p53-induced protein (sestrin), putative
— OG7
TcIL3000_7_5760 ⚠
mitochondrial glycoprotein-like protein, puta
— OG7
TcIL3000_0_19760 ⚠
Ankyrin repeats (3 copies)/Zinc finger, C3HC4
— OG7
TcIL3000_6_4160 ⚠
calmodulin, putative
— OG7
TcIL3000_0_30110 ⚠
WD domain, G-beta repeat, putative
— OG7
TcIL3000_0_21000 ⚠
hypothetical protein, conserved (fragment)
— OG7
TcIL3000_0_13010 ⚠
WD domain, G-beta repeat, putative
— OG7
TcIL3000_10_13410 ⚠
tRNA pseudouridine synthase A-like protein, p
— OG7
TcIL3000_7_1020 ⚠
pseudouridylate synthase I, putative
— OG7
TcIL3000_6_2460 ⚠
pseudouridine synthase A-like protein, putati
— OG7
TcIL3000_10_2340 ⚠
hypothetical protein, conserved
— OG7
TcIL3000_0_54360 ⚠
cyclophilin 15, putative
— OG7
Page 1 of 4
Next →
Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.