TcIL3000_8_4600

Putative snoRNA binding domain containing protein, putative
Trypanosoma congolense IL3000 OG6: OG6_146886 OG7: OG7_0043096 35 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
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Interactions 35 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
TcIL3000.11.12030 ⚠
receptor for activated C kinase 1
— OG7
TcIL3000.11.14090 ⚠
U5 small nuclear ribonucleoprotein component,
— Both
TcIL3000_9_4540 ⚠
PRP8 protein homologue (fragment)
— Both
TcIL3000_9_4550 ⚠
PRP8 protein homologue (fragment)
— Both
TcIL3000_9_1840
hypothetical protein, conserved (fragment)
— Both
TcIL3000_8_5000
U6 snRNA-associated sm-like protein Lsm2
— Both
TcIL3000_9_1390
hypothetical protein, conserved
— Both
TcIL3000.11.15690
U5 snRNP-associated 102 kDa protein, putative
— Both
TcIL3000_2_1520
small nuclear ribonucleoprotein SmD2, putativ
— Both
TcIL3000_3_880 ⚠
U6 snRNA-associated Sm-like protein LSm8p
— Both
TcIL3000_6_2360 ⚠
WD domain, G-beta repeat, putative
— OG7
TcIL3000_9_1040 ⚠
U6 snRNA-associated Sm-like protein LSm6p, Sm
— OG7
TcIL3000_5_4560 ⚠
U6 snRNA-associated Sm-like protein LSm7p, pu
— OG7
TcIL3000.11.8640 ⚠
protein transport protein SEC13, putative
— OG7
TcIL3000.11.14220 ⚠
WD domain, G-beta repeat, putative
— OG7
TcIL3000_10_4140 ⚠
small nuclear ribonucleoprotein, putative
— OG7
TcIL3000_3_1280 ⚠
translation elongation factor EF-2, putative
— OG7
TcIL3000_10_3760 ⚠
elongation factor 2, putative
— OG7
TcIL3000.11.11990 ⚠
luminal binding protein 1 (BiP), putative
— OG6
TcIL3000.11.11810
U5 snRNP-specific 40 kDa protein, putative
— Both
TcIL3000_7_2270
small nuclear ribonucleoprotein SmD1, SmD-1 l
— Both
TcIL3000.11.3720
Dpy-30 motif containing protein, putative
— Both
TcIL3000_0_40190 ⚠
heat shock protein 70 (hsp70), putative
— OG6
TcIL3000_0_02950 ⚠
heat shock 70 kDa protein, putative
— OG6
TcIL3000_0_21650 ⚠
Hsp70 protein, putative (fragment)
— OG6
TcIL3000_0_55930 ⚠
heat shock 70 kDa protein, putative
— OG6
TcIL3000_0_54460 ⚠
heat shock 70 kDa protein, putative
— OG6
TcIL3000_10_820 ⚠
U4/U6-specific protein PRP4
— Both
TcIL3000.11.11940 ⚠
heat shock 70 kDa protein, putative
— OG6
TcIL3000.11.11980 ⚠
heat shock protein 70, putative
— OG6
TcIL3000_0_40210 ⚠
heat shock 70 kDa protein, putative (fragment
— OG6
TcIL3000_0_40200 ⚠
heat shock 70 kDa protein, putative
— OG6
TcIL3000_4_490 ⚠
small nuclear ribonucleoprotein sm d3
— Both
TcIL3000_2_890
small nuclear ribonucleoprotein SmD1, putativ
— Both
TcIL3000_10_12050 ⚠
protein transport protein SEC13
— Both
Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.