TcYC6_0093620

small nuclear ribonucleoprotein, putative
Trypanosoma cruzi Y C6 OG6: OG6_102452 OG7: OG7_0003633 51 interactions (filtered)
Experimental Direct co-fractionation MS evidence Computational Inferred by orthology (OG) transfer ⚠ Ambiguous: multiple orthologs in target organism OG6 / OG7 Ortholog group version used
Source datasets
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Interactions 51 total
Partner Experimental (Co-frac/MS) Computational (OG inference) OG
TcYC6_0080190 ⚠
U2 small nuclear ribonucleoprotein 16.5K, put
— OG7
TcYC6_0091140 ⚠
small nuclear ribonucleoprotein sm d3
— Both
TcYC6_0053880 ⚠
U6 snRNA-associated Sm-like protein LSm4
— OG7
TcYC6_0099660 ⚠
ATP-dependent DEAD/H RNA helicase, putative
— OG7
TcYC6_0114670 ⚠
ATP-dependent RNA helicase HEL67
— Both
TcYC6_0021560 ⚠
U6 snRNA-associated Sm-like protein LSm7p
— OG7
TcYC6_0085400 ⚠
U6 snRNA-associated Sm-like protein LSm6p
— OG7
TcYC6_0011610 ⚠
receptor for activated C kinase 1
— OG7
TcYC6_0096470 ⚠
WD domain, G-beta repeat, putative
— OG7
TcYC6_0126490 ⚠
ATP-dependent RNA helicase DBP2A, putative
— OG7
TcYC6_0066250 ⚠
ATP-dependent DEAD/H RNA helicase
— OG7
TcYC6_0062920 ⚠
ATP-dependent DEAD/H RNA helicase, putative
— OG7
TcYC6_0014480 ⚠
DEAD-box ATP-dependent RNA helicase, mitochon
— OG7
TcYC6_0051670 ⚠
small nuclear ribonucleoprotein component
— Both
TcYC6_0069180 ⚠
ATP-dependent RNA helicase, putative
— OG7
TcYC6_0073050 ⚠
Eukaryotic translation initiation factor 4E-1
— OG7
TcYC6_0011810 ⚠
Eukaryotic translation initiation factor 4E-3
— OG7
TcYC6_0113040 ⚠
eukaryotic translation initiation factor 4E (
— OG7
TcYC6_0080650 ⚠
elongation factor 2
— OG7
TcYC6_0080630 ⚠
elongation factor 2
— OG7
TcYC6_0119810 ⚠
translation elongation factor EF-2, putative
— OG7
TcYC6_0080620 ⚠
elongation factor 2
— OG7
TcYC6_0080640 ⚠
elongation factor 2
— OG7
TcYC6_0080670 ⚠
elongation factor 2
— OG7
TcYC6_0080610 ⚠
elongation factor 2
— OG7
TcYC6_0080660 ⚠
elongation factor 2
— OG7
TcYC6_0021760
arginine N-methyltransferase, type II, putati
— Both
TcYC6_0021460 ⚠
U4/U6 small nuclear ribonuclear protein, puta
— Both
TcYC6_0070170
U5 snRNA-associated splicing factor, putative
— Both
TcYC6_0032370 ⚠
Checkpoint protein HUS1, putative
— Both
TcYC6_0031110 ⚠
spliceosomal U5 snRNP-specific protein, putat
— Both
TcYC6_0031650 ⚠
Checkpoint protein HUS1, putative
— Both
TcYC6_0055460
U6 snRNA-associated sm-like protein Lsm2
— Both
TcYC6_0031940 ⚠
Checkpoint protein HUS1, putative
— Both
TcYC6_0084350
hypothetical protein, conserved
— Both
TcYC6_0055890
u1 small nuclear ribonucleoprotein 70 kDa
— OG6
TcYC6_0070930 ⚠
small nuclear ribonucleoprotein Sm-F, putativ
— +1 more Both
TcYC6_0055930
Putative snoRNA binding domain containing pro
— Both
TcYC6_0020160 ⚠
spliceosomal U5 snRNP-specific protein, putat
— Both
TcYC6_0051120
U5 snRNP-associated 102 kDa protein, putative
— Both
TcYC6_0053250 ⚠
small nuclear ribonucleoprotein Sm-G, putativ
— +1 more Both
TcYC6_0121110
RNA-binding protein 14
— Both
TcYC6_0095240 ⚠
Eukaryotic translation initiation factor 4E-4
— Both
TcYC6_0075710
pre-mRNA splicing factor 19, putative
— Both
TcYC6_0096210 ⚠
small nuclear ribonucleoprotein Sm-E, putativ
— +1 more Both
TcYC6_0009420
U1 small nuclear ribonucleoprotein C, putativ
— Both
TcYC6_0076330
small nuclear ribonucleoprotein protein, puta
— Both
TcYC6_0119340 ⚠
U6 snRNA-associated Sm-like protein LSm8p
— +1 more Both
TcYC6_0077990 ⚠
small nuclear ribonucleoprotein SmD2, putativ
— Both
TcYC6_0077770 ⚠
small nuclear ribonucleoprotein SmD2, putativ
— Both
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Orthogroup expansion — connections between the query proteins
list 30/60/…
How many partner orthogroups appear in the table below. It does not change the analysis — the counts in the summary line always cover all partners.
degree ≤ N
Drops partners that interact with more than N orthogroups across the whole network. Promiscuous hubs connect to everything and explain nothing: the top partner of this query set by raw degree is a retrotransposon hot spot protein touching 586 orthogroups.
Score
(queries touched + 2 if bridge + 0.5 if other-network) ÷ log2(2 + degree). Rewards partners that connect the query set; penalises promiscuity.
Queries
How many of the query proteins' orthogroups this partner interacts with. 2 or more makes it a shared partner.
bridge
It links query proteins that came from different organisms.
other network
At least one of its links is supported only by a dataset from an organism other than that query protein's own — invisible in the network being searched. This is the discovery signal.
complex N
The partner belongs to conserved complex N (two or more datasets).
hub
Degree above 150 — interpret with care.
Click Analyse to look for partners that link the query proteins through the orthogroup network, including links only visible in another organism's dataset.